DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and SRP2

DIOPT Version :9

Sequence 1:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_179060.1 Gene:SRP2 / 815941 AraportID:AT2G14540 Length:407 Species:Arabidopsis thaliana


Alignment Length:431 Identity:103/431 - (23%)
Similarity:177/431 - (41%) Gaps:103/431 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEPQEGRNQFARNLIDVITKDALQQSKDPHINTVFSPASVQSALT---------------LAFM 50
            |.|..:.:|:.:..|:..:.....:.|     |.||||||:.:.||               |:|:
plant    31 MQEAMKNQNEVSLLLVGKVISAVAKNS-----NCVFSPASINAVLTVTAANTDNKTLRSFILSFL 90

  Fly    51 GASGSTAE------EL-----RNGLQLGPGDRHHIALNFGEFWRTSCNYGDRGPVLKSVNRLYVN 104
             .|.||.|      ||     ::|.:.|                        ||.:.:||.:::.
plant    91 -KSSSTEETNAIFHELASVVFKDGSETG------------------------GPKIAAVNGVWME 130

  Fly   105 DSLELLTEFNEIAVDFFQSKAEATRFADSEGATQL-INDWVEQETEHKITNLLQSDAVNNETSAL 168
            .||....::.::.::||::......|.......:| :|.|..:.|...|..:|...:|.:.|:.:
plant   131 QSLSCNPDWEDLFLNFFKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWI 195

  Fly   169 LINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQVNMM--YQE------DKFRFAELPQLKARAV 225
            ..|.|||||.|:|.|....|....||:.....|.|..|  |::      |.|:...||..:.|  
plant   196 YGNALYFKGAWEKAFDKSMTRDKPFHLLNGKSVSVPFMRSYEKQFIEAYDGFKVLRLPYRQGR-- 258

  Fly   226 QLPYDYSN--IHMLILLPNEVNGLQELEQQLNTVDLADIDAALTLQDVEI---FLPRMCIEYDVD 285
                |.:|  ..|.:.||::...|..|.::: |.:...:|:.:....|::   .:|:..||:..:
plant   259 ----DDTNREFSMYLYLPDKKGELDNLLERI-TSNPGFLDSHIPEYRVDVGDFRIPKFKIEFGFE 318

  Fly   286 LKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGYIDVNEAGSEAAAVSFMKIV--PMML 348
            ...|.|...:......||                     .|:::|.|:||||.:.:.:|  ..:.
plant   319 ASSVFNDFELNVSLHQKA---------------------LIEIDEEGTEAAAATTVVVVTGSCLW 362

  Fly   349 NMNKKL-FKADHPFVFYIRNPQ--AVFFAGRFSNPKSGSGS 386
            ...||: |.|||||:|.||..:  .:.|||:..:|...|.:
plant   363 EPKKKIDFVADHPFLFLIREDKTGTLLFAGQIFDPSELSSA 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 99/414 (24%)
SRP2NP_179060.1 SERPIN 36..397 CDD:294093 99/418 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

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