DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dc and LOC569077

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_002665776.1 Gene:LOC569077 / 569077 -ID:- Length:491 Species:Danio rerio


Alignment Length:309 Identity:62/309 - (20%)
Similarity:107/309 - (34%) Gaps:81/309 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 SCNYGDRGPVLKSVNRLYV----NDSLELLTEFNEIAVDFFQSKAEA------------------ 127
            |.||.|..         ||    :|:|:|..:..::.|:....:.:.                  
Zfish   135 SVNYSDHD---------YVSTAESDALDLSLDHTDLRVEIANLRKQIEEISLSNKFCLERFAASD 190

  Fly   128 ------TRFADSEGATQLINDW--VEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFM 184
                  |||| |.|  .|:..|  :|..| .||..:.::....|..              :.|..
Zfish   191 DDIRFYTRFA-SHG--HLMAFWRQIEPAT-GKIVRVSRTQTAANPD--------------EVPHT 237

  Fly   185 PETTS---IDHFHVDRDTHVQVNMMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNG 246
            ...||   ||.|.:.. |::.:.:|.::...||.......:|.:.   .::|....:|.|..:  
Zfish   238 ARATSLPPIDEFFLFM-TYLSLGLMQKDLAHRFRIHQSTVSRIIN---TWANFLYTVLGPVGI-- 296

  Fly   247 LQELEQQLNTVDLADIDAALTLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSD---KAKLDGL 308
              .|::::....:.|:....:  |.::.|.  |.|.....:..|  |..:||||.   .....||
Zfish   297 --WLDEEMVKAHMPDVFQQYS--DTQVILD--CTELRCQTQSSL--LLKSEVFSSYKPHCTFKGL 353

  Fly   309 --FTSQSGQKISAARHRGYIDVNEAGSEAAAVSFMKIVPMMLNMNKKLF 355
              ..........::.:.|.|...|...::..||.:|  |.|..|..|.|
Zfish   354 VGIAPHGAVTFISSLYEGAISDREILKQSGIVSLLK--PTMAIMVDKGF 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 62/309 (20%)
LOC569077XP_002665776.1 THAP 22..100 CDD:461662
HTH_Tnp_4 242..293 CDD:463934 11/54 (20%)
DDE_Tnp_4 321..477 CDD:463855 22/86 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.