DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dc and serpine3

DIOPT Version :9

Sequence 1:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001116709.1 Gene:serpine3 / 556612 ZFINID:ZDB-GENE-050309-223 Length:417 Species:Danio rerio


Alignment Length:401 Identity:112/401 - (27%)
Similarity:192/401 - (47%) Gaps:53/401 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QFARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGPGD---R 71
            ||..:|...:|:   .::|.   |.:.|||||...|.|..:||.|:|..:|...|.....|   :
Zfish    36 QFGISLYQTLTE---TENKS---NLIVSPASVSLCLGLLQLGARGNTLVQLEGTLGYDVNDVRVQ 94

  Fly    72 HHIALNFGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGA 136
            :.::...|:...:|     .|..|:..|.|::...::||.||.:.|:.:..:...:..|::....
Zfish    95 NILSRPQGDLANSS-----EGLRLQLANALFIQTGVKLLPEFTQHALGWGNTSLLSVNFSNPNHT 154

  Fly   137 TQLINDWVEQET---EHKIT--NLLQSDAVNNETS-------ALLINVLYFKGKWQKPFM-PETT 188
            ...:..|...::   :|..|  .|..|.....|.:       ..|::.|.|.|.|||.|: .||.
Zfish   155 HSRLQQWAHYQSKADDHLQTREELHHSSGEEEEATRQDHLLYMALVSTLVFHGAWQKQFLFTETQ 219

  Fly   189 SIDHFHVDRDTHVQVNMMYQEDKFRFA--ELP-QLKARAVQLPYDYSNIHMLILLPNE-VNGLQE 249
            ::.....|..| |:|.||||..:....  .|| :.:...::|||...::.:|:.||:: ...|.:
Zfish   220 NLPFTFSDGST-VKVPMMYQSSEVNIGHFRLPSEQEYTVLELPYLDHSLRLLVALPSDRKTPLSQ 283

  Fly   250 LEQQLNTVDLADIDAALTLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKA-------KLDG 307
            ||:|:....:...|..|....::|||||..::..::||.||..||::::||..|       ..||
Zfish   284 LEKQITARAVGLWDTGLRRTKMDIFLPRFKMQSKINLKPVLQSLGVSDIFSPSAADFRGISDTDG 348

  Fly   308 LFTSQSGQKISAARHRGYIDVNEAGSEAAAVSFMKIVPMMLNMNKK-LFKADHPFVFYIR--NPQ 369
            :|       :|.|.|...|:|.|||::||:.:.|    ::|..::. :||||.||:|.:|  :..
Zfish   349 IF-------VSEAFHEARIEVTEAGTKAASATAM----VLLKRSRSAVFKADRPFLFILRQISTG 402

  Fly   370 AVFFAGRFSNP 380
            ::.|.||..||
Zfish   403 SLLFIGRVVNP 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 109/396 (28%)
serpine3NP_001116709.1 Serpin 35..413 CDD:278507 110/399 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.110

Return to query results.
Submit another query.