DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and serpind1

DIOPT Version :9

Sequence 1:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001015716.1 Gene:serpind1 / 548433 XenbaseID:XB-GENE-6085731 Length:484 Species:Xenopus tropicalis


Alignment Length:389 Identity:109/389 - (28%)
Similarity:182/389 - (46%) Gaps:64/389 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGPGDRHHIALNFGEFWRTSCN 87
            |::.:.|...|.:.:|..:.:|:....:|..|...:::.            ..|.|..|...|..
 Frog   126 AIKNNTDASDNILLAPVGISTAMATISLGTKGQALDQVL------------FTLGFKNFINASSK 178

  Fly    88 Y------------------GDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSE 134
            |                  .:.|..|:|||.:||.....:...|.....:::.::|:...|...:
 Frog   179 YEILTLHNVFRKLTHRLFRRNFGYTLRSVNDIYVKKDFVIREPFKNNLKNYYFAEAQMVDFGSKD 243

  Fly   135 GATQLINDWVEQETEHKITNLLQSDAVNNETSA---LLINVLYFKGKWQKPFMPETTSIDHFHVD 196
            ..|: .|..::|     :|..|..:|:.|...|   ||:|.:||||.|:..|..|.|...:|.::
 Frog   244 FLTK-ANKRIQQ-----LTKGLIKEALTNVDPALLMLLVNCIYFKGTWENKFPVEYTQNMNFRLN 302

  Fly   197 RDTHVQVNMMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLAD 261
            ....|:|.||..:..|..|..|:|....:|||| ..||.|||:||::::|::.||:|::...:..
 Frog   303 EKELVKVPMMKTKGNFLVAADPELDCAVLQLPY-VGNISMLIVLPHKLSGMKLLEKQISPQVVER 366

  Fly   262 IDAALTLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVF--------SDKAKLDGLFTSQSGQKIS 318
            ....:|.:..|:||||..:|...:|::||:.:|:|::|        |||....|||         
 Frog   367 WQNIMTNRTREVFLPRFKLEKSYNLQEVLSNMGVTDLFTHGDFSGVSDKNMNIGLF--------- 422

  Fly   319 AARHRGYIDVNEAGSEAAAVSFMKIVPMMLNMNKKLFKADHPFVF--YIRNPQAVFFAGRFSNP 380
              :|:|.|.|||.|:|||||:.:..:|:   ..:..|.||.||:|  |......:.|.||.:||
 Frog   423 --QHQGTITVNEEGTEAAAVTVVGFMPL---STQARFVADRPFLFLIYEHRTNCLIFMGRVANP 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 106/384 (28%)
serpind1NP_001015716.1 serpinD1_HCF2 38..484 CDD:381004 109/389 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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