DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Serpinb3a

DIOPT Version :9

Sequence 1:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_006249702.1 Gene:Serpinb3a / 498209 RGDID:1562868 Length:387 Species:Rattus norvegicus


Alignment Length:378 Identity:117/378 - (30%)
Similarity:200/378 - (52%) Gaps:19/378 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQL---------GPGDRHHIA 75
            |.:..:|.:|...|..:||.|:.:||.:..:||.|:|.:::...:|.         ...|.|...
  Rat    12 TLELYRQLRDSEDNIFYSPLSIMTALAMLQLGAKGNTEKQIEKVIQFHETTKKTTEKSADCHDEE 76

  Fly    76 LNFGEFWR--TSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFAD-SEGAT 137
            ....:|.:  |..|..:....|.|.|.:|.......|..|.|...:::|:..|:..||. :|.:.
  Rat    77 SVHEQFQKLMTQLNKSNDAYDLNSANSIYGAKHFPFLQTFLEDIKEYYQANVESLDFAHAAEESE 141

  Fly   138 QLINDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQ 202
            :.||.|||.:|..||.:|....::|:.|..:|:|.:||||:|...|..:.|..|.|.::::|...
  Rat   142 KKINSWVENQTNGKIKDLFPKGSLNSSTILVLVNAVYFKGQWNHKFDEKHTEEDKFWLNKNTSKP 206

  Fly   203 VNMMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLADIDAA-- 265
            |.||.|:::|.|..|..::|:.|::||....:.|.||||.|::||::||:||....|.:...|  
  Rat   207 VQMMRQKNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEQLTADKLLEWTRAEN 271

  Fly   266 LTLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVF-SDKAKLDGLFTSQSGQKISAARHRGYIDVN 329
            :.:.|:.:.|||..:|...||...|..:|:.:.| |.||...|:.::| |..:|...|:.:::||
  Rat   272 MNMIDLYLSLPRFKVEEKYDLPGPLQHMGMVDAFDSKKADFSGMSSTQ-GLMVSKVLHKSFVEVN 335

  Fly   330 EAGSEAAAVSFMKIVPMMLNMNKKLFKADHPFVFYIRN--PQAVFFAGRFSNP 380
            |.|:||||.:.:::......:.:. |..||||:|.|::  ..::.|.||.|:|
  Rat   336 EEGTEAAAATGVEVSLTSAQITED-FNCDHPFLFLIKHNATNSILFFGRMSSP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 114/373 (31%)
Serpinb3aXP_006249702.1 SERPIN 5..387 CDD:294093 116/376 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

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