DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Spn55B

DIOPT Version :9

Sequence 1:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster


Alignment Length:382 Identity:128/382 - (33%)
Similarity:208/382 - (54%) Gaps:33/382 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GRNQFARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGPGDR 71
            |..:|...|..:::...|::      |.||||.|:|:.:.|||.|:.|.||:|:...|       
  Fly    11 GGARFTSELFQLLSAGGLKE------NVVFSPFSIQTCIALAFAGSQGETADEIAKAL------- 62

  Fly    72 HHIALNFG-----------EFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKA 125
             |...||.           |.:|.|       .:|:..|:|||.:..:|...:.....:.:.|:|
  Fly    63 -HFVSNFPPEVAQTFQFVLEKYRNS-------NLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEA 119

  Fly   126 EATRFADSEGATQLINDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSI 190
            |:..||.::.|.|.||.||..:|:.|||.|:.:|:.::.|..:|:|.|:|||.|...|..|.|..
  Fly   120 ESINFALNDAAAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEE 184

  Fly   191 DHFHVDRDTHVQVNMMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLN 255
            |.|.|..:..|::|.|.|:.||.:.....|...|:::||..|::.|.:|||.|..|:..|.::|.
  Fly   185 DIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLK 249

  Fly   256 TVDLADIDAALTLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAA 320
            ||:|.|:...||:::|.:..|:..::|.::|.:.|.|||||::|:|:|:...|..|..|..:|..
  Fly   250 TVNLVDLADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKV 314

  Fly   321 RHRGYIDVNEAGSEAAAVSFMKIVPMMLNMNKKLFKADHPFVFYIRNPQAVFFAGRF 377
            .|:..|:|||.|:||||.:.|.::..|:....: |:||.||::.|.|.:.:.|||.|
  Fly   315 LHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQ-FQADRPFLYVIWNKKNILFAGAF 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 127/380 (33%)
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 126/378 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449411
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm8430
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
109.900

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