DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Spn55B

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster


Alignment Length:382 Identity:128/382 - (33%)
Similarity:208/382 - (54%) Gaps:33/382 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GRNQFARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGPGDR 71
            |..:|...|..:::...|::      |.||||.|:|:.:.|||.|:.|.||:|:...|       
  Fly    11 GGARFTSELFQLLSAGGLKE------NVVFSPFSIQTCIALAFAGSQGETADEIAKAL------- 62

  Fly    72 HHIALNFG-----------EFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKA 125
             |...||.           |.:|.|       .:|:..|:|||.:..:|...:.....:.:.|:|
  Fly    63 -HFVSNFPPEVAQTFQFVLEKYRNS-------NLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEA 119

  Fly   126 EATRFADSEGATQLINDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSI 190
            |:..||.::.|.|.||.||..:|:.|||.|:.:|:.::.|..:|:|.|:|||.|...|..|.|..
  Fly   120 ESINFALNDAAAQAINAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERTEE 184

  Fly   191 DHFHVDRDTHVQVNMMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLN 255
            |.|.|..:..|::|.|.|:.||.:.....|...|:::||..|::.|.:|||.|..|:..|.::|.
  Fly   185 DIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLK 249

  Fly   256 TVDLADIDAALTLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAA 320
            ||:|.|:...||:::|.:..|:..::|.::|.:.|.|||||::|:|:|:...|..|..|..:|..
  Fly   250 TVNLVDLADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKV 314

  Fly   321 RHRGYIDVNEAGSEAAAVSFMKIVPMMLNMNKKLFKADHPFVFYIRNPQAVFFAGRF 377
            .|:..|:|||.|:||||.:.|.::..|:....: |:||.||::.|.|.:.:.|||.|
  Fly   315 LHKATIEVNEEGTEAAAATGMIMMTRMMTFPLQ-FQADRPFLYVIWNKKNILFAGAF 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 128/382 (34%)
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 124/374 (33%)

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