DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and serpina3

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001011275.1 Gene:serpina3 / 496728 XenbaseID:XB-GENE-5933441 Length:414 Species:Xenopus tropicalis


Alignment Length:376 Identity:107/376 - (28%)
Similarity:187/376 - (49%) Gaps:17/376 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLG----PGDR 71
            ||.||...:......:.:....|.||||.|:.:|.::..:||...:.:::.:||.|.    |.:.
 Frog    47 FALNLYKHLVTKTQAEKESTQKNIVFSPLSILTAFSMLLLGAKSESHQQILSGLSLNQTQVPEED 111

  Fly    72 HHIALNFGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGA 136
            .|.|.   |......|.......:|..|.::|.|:|::|..|.:.....:.::...:.|.:...|
 Frog   112 MHEAF---EHLLQVLNRPKSDLQVKIGNAVFVEDTLKILDSFVQEIEHHYHAEIFPSHFKNPAEA 173

  Fly   137 TQLINDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHV 201
            .:.|||:|..:||.:|..|::.  ::..|..::||.:.|..:||.||....|....|.||.:|.|
 Frog   174 EKQINDFVNNKTEGRIQELVKD--LSEATKLVVINFILFNAEWQNPFSSFFTHSRQFSVDENTTV 236

  Fly   202 QVNMMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLADIDAAL 266
            :|.||.:.|.::|.:..::....:||||. :|..|||::| |:..:.|:|:.|:...|....::.
 Frog   237 EVQMMSKTDLYQFYKDEKIPCSVLQLPYK-NNASMLIIVP-ELGKIHEVEEALSVETLKRWTSSA 299

  Fly   267 TLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGYIDVNEA 331
            .....|:|||:..|...:.||.:|..:|:..:|:|.|...|: :..|..|:|...|:..::|.|.
 Frog   300 EKSFFELFLPKFSISSSLKLKDILTDMGMGIIFTDAADFSGI-SENSRLKLSKVVHKAVLNVAEN 363

  Fly   332 GSEAAAVSFMKIVPMMLNMNKKLFKADHPFVFYI--RNPQAVFFAGRFSNP 380
            |:||||.|.::.|...|.:.   |..|.||:..|  :.|.::.|..|..:|
 Frog   364 GTEAAAASAVEGVLTSLMVQ---FVVDKPFITLICSQEPYSILFMSRVIDP 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 106/374 (28%)
serpina3NP_001011275.1 serpinA 43..411 CDD:381073 106/374 (28%)

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