DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dc and serpinb1

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001002653.1 Gene:serpinb1 / 436926 ZFINID:ZDB-GENE-040718-400 Length:380 Species:Danio rerio


Alignment Length:365 Identity:129/365 - (35%)
Similarity:197/365 - (53%) Gaps:29/365 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGP-GDRH-HIALNFGEFWRTSCNYGDRGPVL 95
            |..|||.|:.:||::.::||.|.||.|:...|.... .|.| |.     |...:|.|......:|
Zfish    27 NIFFSPLSISAALSMVYLGARGDTAGEMEKVLSFSSVSDVHSHF-----ESLISSINSPSASYIL 86

  Fly    96 KSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRF-ADSEGATQLINDWVEQETEHKITNLLQSD 159
            :..||||...:...|.|:...:::.:.:..:|..| ..||.:.||||.|||::||:||.:||:..
Zfish    87 RLANRLYGEKTFSFLPEYLSSSLNLYHADLQAVDFIGASEQSRQLINKWVEEQTENKIRDLLKPG 151

  Fly   160 AVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQVNMMYQEDKFRFAELPQLKARA 224
            .|...|...|:|.:||||.|.:.|..:.|....|.:::..:..|.||||:.||.|..:...:.:.
Zfish   152 MVTGMTRLALVNAIYFKGNWLQRFNAQDTKEMPFKINQKENRPVQMMYQKKKFPFNYIYDHRVQV 216

  Fly   225 VQLPYDYSNIHMLILLPNEV----NGLQELEQQLNTVDLA-------DIDAALTLQDVEIFLPRM 278
            ::|||....:.||||||.|.    :.|.:||.:| |:|..       ::|   |..|:.:.|||.
Zfish   217 LELPYVKEELSMLILLPEETQDGSDPLLKLESEL-TIDKLHEWTNRNNMD---TQTDIIVHLPRF 277

  Fly   279 CIEYDVDLKQVLNQLGITEVFSD-KAKLDGLFTSQSGQKISAARHRGYIDVNEAGSEAAAVSFMK 342
            .:|.:..|.::|..:|::.||.: ||.|.|: |...|..:||..|:.::||||.|:||||.:...
Zfish   278 KLEIESSLVEILMGMGMSSVFQEGKADLTGM-TGHGGLFLSAVAHKAFVDVNEEGTEAAAATAAI 341

  Fly   343 IVPMMLNMNKKLFKADHPFVFYIR-NP-QAVFFAGRFSNP 380
            :...||  .::.|.|||||:|||| || .::.|.|||..|
Zfish   342 VAFCML--REEHFMADHPFLFYIRHNPTNSILFFGRFRGP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 128/363 (35%)
serpinb1NP_001002653.1 serpinB1_LEI 1..379 CDD:381028 128/363 (35%)

Return to query results.
Submit another query.