DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dc and Spn88Eb

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster


Alignment Length:384 Identity:108/384 - (28%)
Similarity:179/384 - (46%) Gaps:47/384 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGPG-DRHHIALNF------GEF-WRTSC 86
            |..|..|||.|..:||.||:..:|..|..||...|.||.. ::..:.:::      .|| ||.| 
  Fly    54 PSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWALNKQQVLVSYTLAQRQDEFRWRQS- 117

  Fly    87 NYGDRGPV-LKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGATQLINDWVEQETEH 150
                  |: |.|.||::|:.::.:..:||.:   .:.:..|.....|.|...:.||||:..:|.:
  Fly   118 ------PMELSSANRIFVDRTINVSNKFNTL---LYGATKELDFKNDPETGLKEINDWIADKTHN 173

  Fly   151 KITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQVNMMYQEDKFRFA 215
            :|.::|.|:.:...|..:|.|..|.||:|...|..|.|::..|.::......|.||::...|:..
  Fly   174 QIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVYMMHKTGAFKMT 238

  Fly   216 ELPQLKARAVQLPY---------------DYSNIHMLILLPNEVN-GLQELEQQLNTVDLAD--- 261
            ....|:::.::|||               ..|:|.|:|:|||... .|..:..:||    ||   
  Fly   239 IDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNRVISRLN----ADSVK 299

  Fly   262 --IDAALTLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRG 324
              .:.||. |.:|:.||:...|..::|..:|:.:|:..:|:..|....|........|..|:|..
  Fly   300 KWFERALP-QKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTADPISLVIDDAQHLA 363

  Fly   325 YIDVNEAGSEAAAVSFMKIVPMMLNMNKKLFKADHPFVF--YIRNPQAVFFAGRFSNPK 381
            .|.|:|.||.|||.:.:.:.......:...|..:|||||  |......:.|||.:|:|:
  Fly   364 KIKVDEVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAGVYSDPR 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 107/381 (28%)
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 107/381 (28%)

Return to query results.
Submit another query.