DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Serpinb6b

DIOPT Version :9

Sequence 1:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_038951899.1 Gene:Serpinb6b / 364705 RGDID:1310452 Length:388 Species:Rattus norvegicus


Alignment Length:405 Identity:130/405 - (32%)
Similarity:216/405 - (53%) Gaps:52/405 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EGRNQFARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQL---- 66
            |....||.||:..:.:|:   ||    |.:|||.|:.|.|.:.||||.|:||.::...|.|    
  Rat     6 EANGTFAFNLLKTLGEDS---SK----NVLFSPLSISSGLAMVFMGAKGTTAHQMIQALSLDKCS 63

  Fly    67 GPGDRH-HIALN--FGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEAT 128
            |.|.|. |....  ..:..:|...|     :||:.|||:...:.::|..|.:....|::::.|..
  Rat    64 GRGSRDVHQGFQSLLAKVNKTGTQY-----LLKTANRLFGEKTFDILASFKDACRKFYEAEMEEL 123

  Fly   129 RFADS-EGATQLINDWVEQETE-----------HKITNLLQSDAVNNETSALLINVLYFKGKWQK 181
            .|..: |.:.|.||.||.::||           .|||.||.|.:||..|..:|:|.:||||.|:|
  Rat   124 DFKGAPEQSRQHINTWVAKKTEGQSISLNWNSQKKITELLSSGSVNANTPLVLVNAIYFKGNWKK 188

  Fly   182 PFMPETTSIDHFHVDRDTHVQVNMMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNG 246
            .|..|.|....|.|.::....|.||:::..|:...:.::....:.|||..:.::|:|:||:|...
  Rat   189 QFNKEDTQEMPFKVTKNEEKPVKMMFKKSTFKMTYVEEISTTILLLPYVGNELNMIIMLPDEHIE 253

  Fly   247 LQELEQQL---NTVDLADIDAALTLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSD-KAKLDG 307
            |:.:|:::   ..::...:| .:..::||:|||:..:|.:.|:|.||::||:|:.|.. .|...|
  Rat   254 LRMVEKEITYKKFIEWTSLD-KMEEREVEVFLPKFKLEENHDMKDVLHRLGMTDAFEQGMADFSG 317

  Fly   308 LFTSQSGQKISAARHRGYIDVNEAGSEAAA-----VSFMKIVPMMLNMNKKLFKADHPFVFYIRN 367
            : .|:.|..:|...|:.:::|||.|:||||     |:|..:||        .|.|:|||:|:|::
  Rat   318 I-ASKEGLFLSKVIHKSFVEVNEEGTEAAAATAANVTFRCMVP--------YFCANHPFLFFIQH 373

  Fly   368 PQ--AVFFAGRFSNP 380
            .:  .:.|.||||:|
  Rat   374 SRTNGIVFCGRFSSP 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 125/399 (31%)
Serpinb6bXP_038951899.1 serpin 1..388 CDD:422956 129/403 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

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