DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dc and Spn28B

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster


Alignment Length:365 Identity:112/365 - (30%)
Similarity:188/365 - (51%) Gaps:24/365 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGPGDRHHIALNFGEFWRTSCNYGDR 91
            |::...|.::||.|.:..:::.:|.:.|.|.|||||.|:... ::..:|.|:... .:.....:.
  Fly    27 SQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSE-NKTLVANNYRSL-LSDLKRRET 89

  Fly    92 GPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGATQLINDWVEQETEHKITNLL 156
            ..:|...||:|||....|:.|||::|...|::||::.|..|...|:.::|.|:...|...|.|::
  Fly    90 FIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVSASAIVNSWILNRTRGMIRNIV 154

  Fly   157 QSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQVNMMYQEDKFRFAELPQLK 221
            .....|::|||.|:|.:||||:|...|..:.|.|..|:|..:..:.|.||..........:..:.
  Fly   155 LPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSASLLSGYIDDID 219

  Fly   222 ARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLADIDAALTLQDVEIFLPRMCIEYDVDL 286
            |:.::|||..|.:.|.|:|||.|:||::|::::..     ||..|..:.|.:.||:..||....|
  Fly   220 AKIIELPYWNSTLSMRIILPNSVDGLRKLKEKVGF-----IDYHLEKKSVNVKLPKFKIESKAQL 279

  Fly   287 KQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGYIDVNEAGSEAAAVSFMKIVPMMLNMN 351
            |.:...|||.:||...|.|:|| ..:||.||.....:.::.::|.|.||:|.:      .:|...
  Fly   280 KGIFENLGILDVFKPSADLNGL-VLESGAKIDKIVQKAFLKIDEKGGEASAAT------GVLTRR 337

  Fly   352 KKL----------FKADHPFVFYIRNPQAVFFAGRFSNPK 381
            ||.          |.|||||.:.|.:.:.::|.|....|:
  Fly   338 KKSIDNLIQPPMEFIADHPFFYVIHDNKVIYFQGHIVEPR 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 111/362 (31%)
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 111/362 (31%)

Return to query results.
Submit another query.