DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Spn28Db

DIOPT Version :9

Sequence 1:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster


Alignment Length:375 Identity:111/375 - (29%)
Similarity:190/375 - (50%) Gaps:37/375 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QFARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGPGDRHHI 74
            :|..||::::...|       ..|.:.||..::..:::..|||.|:||||||:.|.| |.|...:
  Fly    22 KFKLNLLELVMDKA-------ESNFIASPLCIEIGISMILMGAKGTTAEELRSVLDL-PVDVTEM 78

  Fly    75 ALNFGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGATQL 139
            |   .::.|...|: .:...|:..|.||||::.|:..::|.:....|.  ||.........|:..
  Fly    79 A---KKYERIMSNF-QKHNGLRFTNWLYVNETYEVRQDYNTLMKSTFM--AEGKDPLSQRKASNS 137

  Fly   140 INDWVEQETEHKITNLLQSD---AVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHV 201
            |:..:.::: ||....:.:|   .:|.  ||:|:|.:|:.|.|:..|..:.|.:..||.|.:..|
  Fly   138 ISFSIHRKS-HKGMRTISNDHNLQINE--SAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKKV 199

  Fly   202 QVNMMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLADIDAAL 266
            .|.||....:||.|:  ....:.:::|:|.|::.|:|.||.....|..:|:.|.|     :..:|
  Fly   200 YVRMMSHVGRFRIAD--HSYGQIIEMPFDNSDLSMIIGLPLHNTYLSSIEKILRT-----LSESL 257

  Fly   267 TLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGYIDVNEA 331
            ...:|.:.||:..|:|..:|.:.|.:|||..:||:.:.|.||.|:.:|.||:...|:.:|::||.
  Fly   258 VENNVHVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAKINHVVHKSFIEINER 322

  Fly   332 GSEAAAVSFMKIVPMMLNMNKKL-----FKADHPFVFYIRNPQAVFFAGR 376
            |:.....|     ....::.||.     ||.:.||||.||:...|:|.||
  Fly   323 GASTGEAS-----DHAESIQKKTRASTSFKVNRPFVFLIRDKHTVYFRGR 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 111/375 (30%)
Spn28DbNP_001356884.1 SERPIN 22..368 CDD:238101 111/375 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446412
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
77.000

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