DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Serpinb1b

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_038952280.1 Gene:Serpinb1b / 306891 RGDID:1560658 Length:380 Species:Rattus norvegicus


Alignment Length:415 Identity:133/415 - (32%)
Similarity:203/415 - (48%) Gaps:70/415 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEPQEGRNQFARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTA-------- 57
            |.:.....:.||..|...:       |:......:|||.|:.|||.:.|:||.||:|        
  Rat     1 MEQLSSANSLFALELFHTL-------SESSPTGNIFSPFSISSALAMVFLGAKGSSAPSSLRLAE 58

  Fly    58 -------EELRNGLQ-LGPGDRHHIALNFGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEF- 113
                   |::.:..| |....|.|.|.:                .||..||||...:...|.|| 
  Rat    59 TFHFDSVEDIHSRFQSLNAEMRKHGASH----------------TLKVANRLYGEKTYNFLPEFL 107

  Fly   114 --------NEIA-VDFFQSKAEATRFADSEGATQLINDWVEQETEHKITNLLQSDAVNNETSALL 169
                    .::| |||..:         ||.|.:.||.||:.:||.||..||....||:.|..:|
  Rat   108 ASTQKMYGADLAPVDFQHA---------SEDARKEINKWVKGQTEGKIPELLAGGVVNSTTKLVL 163

  Fly   170 INVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQVNMMYQEDKFRFAELPQLKARAVQLPYDYSNI 234
            :|.:||||.||:.|:...|:...|.:::.....|.||||::||.|..:|.||.:.:::||....:
  Rat   164 VNAIYFKGIWQEKFLTRHTTDAPFRLNKKDTKMVKMMYQKEKFPFGYIPDLKCKVLEMPYQGGEL 228

  Fly   235 HMLILLPNEV----NGLQELEQQLNTVDLADIDAALTLQ--DVEIFLPRMCIEYDVDLKQVLNQL 293
            .|:||||.::    .|||::|:||....|.:......|:  ||.:.||:..||....|...|.:|
  Rat   229 SMVILLPEDIEDESTGLQKIEEQLTLEKLYEWTKHENLKEIDVHVNLPKFKIEESYILNSNLGRL 293

  Fly   294 GITEVF-SDKAKLDGLFTSQSGQKISAARHRGYIDVNEAGSEAAAVSFMKIVPMMLNMNKKLFKA 357
            |:.::| |.||.|.|:..|:. ..||...|:.:::|||.|:||||.:...:...::::  :.|..
  Rat   294 GLQDLFSSSKADLSGMSESRD-IFISKIVHKSFVEVNEEGTEAAAATAGLVEYCLVSI--EAFIV 355

  Fly   358 DHPFVFYIR-NPQA-VFFAGRFSNP 380
            ||||:|:|| ||.| :.|.||..:|
  Rat   356 DHPFLFFIRHNPTANMLFFGRVCSP 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 131/407 (32%)
Serpinb1bXP_038952280.1 serpinB1_LEI 1..380 CDD:381028 132/413 (32%)

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