DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Serpinb3

DIOPT Version :9

Sequence 1:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001382662.1 Gene:Serpinb3 / 304688 RGDID:1549766 Length:387 Species:Rattus norvegicus


Alignment Length:383 Identity:118/383 - (30%)
Similarity:200/383 - (52%) Gaps:29/383 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLG-----PGDR---HHIAL 76
            |.:..:|.:|...|..:||.|:.:||.:..:||.|:|.:::...|||.     |.::   .|...
  Rat    12 TLELYRQLRDSEDNIFYSPLSIMTALAMLQLGAKGNTEKQIEKALQLSETTKKPKEKSADSHDEE 76

  Fly    77 NFGEFWR---TSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFAD-SEGAT 137
            |..|.:|   ...|..:....|||.|.:|.......|..|.|....::|:..|:..||. :|.:.
  Rat    77 NVHEQFRKIMNQLNKSNGAYDLKSPNSIYGAKGFPFLQTFMEDIKKYYQANVESLDFAHAAEESQ 141

  Fly   138 QLINDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQ 202
            :.||.|||.:|..||.:|....::|:.|..:|:|.:||||:|...|..:.|..|.|.::::|...
  Rat   142 KKINSWVENKTNGKIKDLFPRGSLNSSTILVLVNAVYFKGQWNHKFDEQRTREDKFWLNKNTSKP 206

  Fly   203 VNMMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLADIDAALT 267
            |.||.|.::|.|..|..::|:.|::||....:.|.||||.|::||::||::|:    ||...|.|
  Rat   207 VQMMRQTNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEKLS----ADTLLAWT 267

  Fly   268 ------LQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFS-DKAKLDGLFTSQSGQKISAARHRGY 325
                  :..:.:.|||..::...||...|..:|:.:.|: .||...|: :|..|..:|...|:.:
  Rat   268 SPKNMRMTQLNLSLPRFKVQEKYDLPGPLEHMGMVDAFNPQKADFSGM-SSTKGLVVSKVLHKSF 331

  Fly   326 IDVNEAGSEAAAVSFMKIVPMMLNMNKKL-FKADHPFVFYIR--NPQAVFFAGRFSNP 380
            ::|||.|:||||.:  .:...:|:..:.. |..:.||:.:|:  |..::.|.||.|:|
  Rat   332 LEVNEEGAEAAAAT--GVETRILSAPRTTEFTCNRPFIVFIKPNNTNSILFFGRVSSP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 115/378 (30%)
Serpinb3NP_001382662.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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