DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Serpinb3

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001382662.1 Gene:Serpinb3 / 304688 RGDID:1549766 Length:387 Species:Rattus norvegicus


Alignment Length:383 Identity:118/383 - (30%)
Similarity:200/383 - (52%) Gaps:29/383 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLG-----PGDR---HHIAL 76
            |.:..:|.:|...|..:||.|:.:||.:..:||.|:|.:::...|||.     |.::   .|...
  Rat    12 TLELYRQLRDSEDNIFYSPLSIMTALAMLQLGAKGNTEKQIEKALQLSETTKKPKEKSADSHDEE 76

  Fly    77 NFGEFWR---TSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFAD-SEGAT 137
            |..|.:|   ...|..:....|||.|.:|.......|..|.|....::|:..|:..||. :|.:.
  Rat    77 NVHEQFRKIMNQLNKSNGAYDLKSPNSIYGAKGFPFLQTFMEDIKKYYQANVESLDFAHAAEESQ 141

  Fly   138 QLINDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQ 202
            :.||.|||.:|..||.:|....::|:.|..:|:|.:||||:|...|..:.|..|.|.::::|...
  Rat   142 KKINSWVENKTNGKIKDLFPRGSLNSSTILVLVNAVYFKGQWNHKFDEQRTREDKFWLNKNTSKP 206

  Fly   203 VNMMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLADIDAALT 267
            |.||.|.::|.|..|..::|:.|::||....:.|.||||.|::||::||::|:    ||...|.|
  Rat   207 VQMMRQTNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEKLS----ADTLLAWT 267

  Fly   268 ------LQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFS-DKAKLDGLFTSQSGQKISAARHRGY 325
                  :..:.:.|||..::...||...|..:|:.:.|: .||...|: :|..|..:|...|:.:
  Rat   268 SPKNMRMTQLNLSLPRFKVQEKYDLPGPLEHMGMVDAFNPQKADFSGM-SSTKGLVVSKVLHKSF 331

  Fly   326 IDVNEAGSEAAAVSFMKIVPMMLNMNKKL-FKADHPFVFYIR--NPQAVFFAGRFSNP 380
            ::|||.|:||||.:  .:...:|:..:.. |..:.||:.:|:  |..::.|.||.|:|
  Rat   332 LEVNEEGAEAAAAT--GVETRILSAPRTTEFTCNRPFIVFIKPNNTNSILFFGRVSSP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 117/381 (31%)
Serpinb3NP_001382662.1 serpin 1..387 CDD:476815 117/381 (31%)

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