DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Serpina3m

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001257911.1 Gene:Serpina3m / 299276 RGDID:735068 Length:419 Species:Rattus norvegicus


Alignment Length:368 Identity:116/368 - (31%)
Similarity:187/368 - (50%) Gaps:31/368 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGPGDRHH--IALNFGEFWRTSCNYGD 90
            |:|..|.||||.|:.:||.:..:||.|:|.||:...|:....:.:.  |...||...:.....||
  Rat    65 KNPDKNVVFSPLSISAALAIVSLGAKGNTLEEILEVLRFNLTESYETDIHQGFGHLLQRLSQPGD 129

  Fly    91 RGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGATQLINDWVEQETEHKITNL 155
            :..::.. |.|:::.:|::|.||.|.....:|.:|....|.......:||||:|..:|:.||..|
  Rat   130 QVKIITG-NALFIDKNLQVLAEFQEKTRALYQVEAFTADFQQPRVTEKLINDYVRNQTQGKIQEL 193

  Fly   156 LQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQVNMMYQED----KFRFAE 216
            :  ..:...||.:|:|.|.|:|||:.||.|:.|....|:||....|:|:||..|:    .||..|
  Rat   194 V--SGLKERTSMVLVNYLLFRGKWKVPFDPDYTFESEFYVDEKRSVKVSMMKIEELTTPYFRDEE 256

  Fly   217 LPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLADIDAALTLQDV-EIFLPRMCI 280
               |....::|.|. .|...|.:||:: ..:|::|..|....|.....:|..:.: |::|||:.|
  Rat   257 ---LSCSVLELKYT-GNSSALFILPDK-GRMQQVEASLQPETLKKWKDSLRPRKIDELYLPRLSI 316

  Fly   281 EYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGYIDVNEAGSEAAAVSFMKIV- 344
            ..|..|::||.:|||.:|||.:|.|..: |......:|...|:..:||||.|:||||.:...:| 
  Rat   317 STDYSLEEVLPELGIRDVFSQQADLSRI-TGAKDLSVSQVVHKVVLDVNETGTEAAAATGANLVP 380

  Fly   345 -----PMMLNMNKKLFKADHPFVFYIRNP--QAVFFAGRFSNP 380
                 ||::..|:       ||:..:.:.  |.:.|..:..||
  Rat   381 RSGRPPMIVWFNR-------PFLIAVSHTHGQTILFMAKVINP 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 114/366 (31%)
Serpina3mNP_001257911.1 serpinA3_A1AC 37..416 CDD:381019 114/366 (31%)

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