DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Serpinh1

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_058869.2 Gene:Serpinh1 / 29345 RGDID:69302 Length:417 Species:Rattus norvegicus


Alignment Length:382 Identity:102/382 - (26%)
Similarity:168/382 - (43%) Gaps:34/382 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGPGDRHHIAL 76
            |.:|...:.||...:      |.:.||..|.|:|.|..:|...:||.:.:..|.........:..
  Rat    50 AFSLYQAMAKDQAVE------NILLSPLVVASSLGLVSLGGKATTASQAKAVLSAEKLRDEEVHT 108

  Fly    77 NFGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGATQLIN 141
            ..||..|:..|...|....|..:|||...|:....:|...:...:..:.....|.|...|.|.||
  Rat   109 GLGELLRSLSNSTARNVTWKLGSRLYGPSSVSFADDFVRSSKQHYNCEHSKINFRDKRSALQSIN 173

  Fly   142 DWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQVNMM 206
            :|..|.|:.|:..:.:.  |.....|||:|.::||..|.:.|..:......|.|.|...|.|.||
  Rat   174 EWASQTTDGKLPEVTKD--VERTDGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVGVTMM 236

  Fly   207 YQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLADIDAALTLQDV 271
            ::...:.:.:..:.|.:.|::|..:....::||:|:.|..|:.||:.|....|......:..:.|
  Rat   237 HRTGLYNYYDDEKEKLQLVEMPLAHKLSSLIILMPHHVEPLERLEKLLTKEQLKTWMGKMQKKAV 301

  Fly   272 EIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQK---ISAARHRGYIDVNEAGS 333
            .|.||:..:|...||::.|..||:||.. ||.|.|  .:..||:|   :::..|....:.:..|:
  Rat   302 AISLPKGVVEVTHDLQKHLAGLGLTEAI-DKNKAD--LSRMSGKKDLYLASVFHATAFEWDTEGN 363

  Fly   334 EAAAVSFMKIVPMMLNM-------NKKLFKADHPFVFYIRNPQ--AVFFAGRFSNPK 381
                       |...::       :.|||.|||||:|.:|:.|  ::.|.||...||
  Rat   364 -----------PFDQDIYGREELRSPKLFYADHPFIFLVRDNQSGSLLFIGRLVRPK 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 100/379 (26%)
Serpinh1NP_058869.2 serpinH1_CBP1 35..416 CDD:381003 102/382 (27%)
Prevents secretion from ER. /evidence=ECO:0000305 414..417
Blue background indicates that the domain is not in the aligned region.

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