DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Serpinb8

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001099418.1 Gene:Serpinb8 / 288937 RGDID:1309833 Length:375 Species:Rattus norvegicus


Alignment Length:395 Identity:130/395 - (32%)
Similarity:206/395 - (52%) Gaps:35/395 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEPQEGRNQFARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQ 65
            |.:..|....||.:|:.::.::      |...|..|.|.||.|||.:.::||.|:||.::...|.
  Rat     1 MDDLCEANGSFAISLLKILGEE------DKSRNLFFCPMSVSSALAMVYLGAKGNTATQMSQVLG 59

  Fly    66 L-GPGDRHH-IALNFGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEAT 128
            | |.||.|. ......|..::...|     :|||..||:..:|.:.|:.|.|....|:|:..|..
  Rat    60 LSGDGDVHQGFQTLLAEVNKSGTQY-----LLKSACRLFGEESCDFLSTFKESCQKFYQAGIEEM 119

  Fly   129 RFA-DSEGATQLINDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDH 192
            .|. |:||..:.|||||.::||.||:.:|....|...|..:|:|.:||||||:..|..:.|....
  Rat   120 SFVKDTEGCRKRINDWVLEKTEGKISEVLSPGTVCPLTKLVLVNAMYFKGKWKAQFDRKYTRGMP 184

  Fly   193 FHVDRDTHVQVNMMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTV 257
            |..:::....|.||::..||:.|.:.::.|:.:.|||....:.|::|||:|.:.|..:|:.|...
  Rat   185 FKTNQEEKKTVQMMFKHAKFKMAHVDEVNAQVLALPYAEDELSMVVLLPDESSDLTVVEKALTYE 249

  Fly   258 DLA--DIDAALTLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSD-KAKLDGLFTSQSGQKISA 319
            .|.  .....||...|::|.||:.:|...||:.||..||:|:.|.: ||...|: ||:....:|.
  Rat   250 KLRAWTNPETLTESKVQVFFPRLKLEESYDLETVLQSLGMTDAFEETKADFSGM-TSKKNVPVSK 313

  Fly   320 ARHRGYIDVNEAGSEAAAVSFM-------KIVPMMLNMNKKLFKADHPFVFYI--RNPQAVFFAG 375
            ..|:.:::|||.|:||||.:.:       :|.|.        |.||.||:|:|  :...::.|.|
  Rat   314 VAHKCFVEVNEEGTEAAATTAVIRNTRSCRIEPR--------FCADRPFLFFIWHQKTSSILFCG 370

  Fly   376 RFSNP 380
            |||:|
  Rat   371 RFSSP 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 127/387 (33%)
Serpinb8NP_001099418.1 serpin 1..375 CDD:476815 129/393 (33%)

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