DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Serpina4

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_659565.2 Gene:Serpina4 / 246328 RGDID:708581 Length:423 Species:Rattus norvegicus


Alignment Length:399 Identity:110/399 - (27%)
Similarity:181/399 - (45%) Gaps:53/399 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GRNQFARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGL------- 64
            |...||..|..:|.      |::...|..|||.|:..:|.:...||.|.|..::..||       
  Rat    51 GNANFAFRLYHLIA------SQNSEKNIFFSPLSISVSLAILSTGAGGDTQAQILEGLGFNLTKL 109

  Fly    65 ---QLGPGDR---HHIALNFGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQS 123
               ::..|.|   |.||..|.|            |.:...:.|.::.:|::|:||.......:.|
  Rat   110 SLPEIHEGFRSLQHTIARPFTE------------PQISVGSALILSQNLQILSEFVSAIETSYNS 162

  Fly   124 KAEATRFADSEGATQLINDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETT 188
            |.....|.|.|.|.||||::|:|.|:.||.||: || ::.:...:|:|.::|:|.|:|||.....
  Rat   163 KVLHANFRDKEAAVQLINNYVKQNTQGKIKNLV-SD-LSPDVKMVLVNYIFFQGLWKKPFPSSRV 225

  Fly   189 SIDHFHVDRDTHVQVNMMYQEDKFRFAELPQLKARAVQLPYDY-SNIHMLILLPNEVNGLQELEQ 252
            |...|:||.:|.|::.||.| ||.....|...:.....|..|| .:.....:||:: ..:.|:||
  Rat   226 STSDFYVDENTVVKIPMMLQ-DKEDHWYLEDRRVPCTVLRMDYRGDAVAFFILPDQ-GKMNEVEQ 288

  Fly   253 QLNTVDLAD----IDAALTLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQS 313
            .|:...|..    :......:.:.:.||:..|....:|.::|..||..::|:..|....: :.:.
  Rat   289 VLSPGMLLRWKRLLQNRFFYRKLILQLPKFSISNSYELDEILPDLGFQDLFTPNANFSNI-SKKE 352

  Fly   314 GQKISAARHRGYIDVNEAGSEAAA-----VSFMKIVPMMLNMNKKLFKADHPF--VFYIRNPQAV 371
            ...:|...|:..:||||.|::|||     .:|....|     .|:....:.||  :.|..:.|.:
  Rat   353 KLYLSKVFHKTVLDVNEVGTKAAAATGSFATFFSAQP-----KKRYLIFNRPFLVILYSTSSQDI 412

  Fly   372 FFAGRFSNP 380
            .|.|:..||
  Rat   413 LFMGKVVNP 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 108/397 (27%)
Serpina4NP_659565.2 serpinA4_KST 41..423 CDD:381020 110/399 (28%)

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