DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dc and Serpine1

DIOPT Version :9

Sequence 1:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_036752.2 Gene:Serpine1 / 24617 RGDID:3249 Length:402 Species:Rattus norvegicus


Alignment Length:418 Identity:113/418 - (27%)
Similarity:187/418 - (44%) Gaps:83/418 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PQEGRNQFARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGP 68
            |:....|.|.|....:.:..:|.|||.  |.||||..|.|.|.:..:..:|.|.:::::      
  Rat    27 PESHTAQQATNFGVKVFQHVVQASKDR--NVVFSPYGVSSVLAMLQLTTAGKTRQQIQD------ 83

  Fly    69 GDRHHIALNFGEFWRTSCNYGDRG--PVLKSVNR----------------LYVNDSLELLTEFNE 115
                  |:.|        |..:||  |.|:.:::                ::|...|||:..|..
  Rat    84 ------AMGF--------NISERGTAPALRKLSKELMGSWNKNEISTADAIFVQRDLELVQGFMP 134

  Fly   116 IAVDFFQSKAEATRFADSEGATQLINDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQ 180
            .....|::..:...|::.|.|..:||||||:.|:..|::||...|||..|..:|:|.|||.|:|:
  Rat   135 HFFKLFRTTVKQVDFSEMERARFIINDWVERHTKGMISDLLAKGAVNELTRLVLVNALYFNGQWK 199

  Fly   181 KPFMPETTSIDHFHVDRDTHVQVNMMYQEDKFRFAELPQLKAR---AVQLPYDYSNIHMLILLPN 242
            .||:..:|....||....:.:.|.||.|.:||.:.|.......   .::|||....:.|.|..|.
  Rat   200 TPFLEASTHQRLFHKSDGSTISVPMMAQNNKFNYTEFTTPDGHEYDILELPYHGETLSMFIAAPF 264

  Fly   243 EVNGLQELEQQLNTVDLADIDAALTLQDVE---------------IFLPRMCIEYDVDLKQVLNQ 292
            |.:              ..:.|...:.|.|               :.||:..:|.:|||:..|.:
  Rat   265 EKD--------------VPLSAITNILDAELIRQWKSNMTRLPRLLILPKFSLETEVDLRGPLEK 315

  Fly   293 LGITEVFSDKAKLDGLFTSQSGQK---ISAARHRGYIDVNEAGSEAAAVSFMKIVPMMLNMNKKL 354
            ||:|::|| ..:.|  |||.|.|:   ::.|..:..|:|||:|:.|::.:.:.:...|......|
  Rat   316 LGMTDIFS-STQAD--FTSLSDQEQLSVAQALQKVKIEVNESGTVASSSTAILVSARMAPTEMVL 377

  Fly   355 FKADHPFVFYIR-NP-QAVFFAGRFSNP 380
               |..|:|.:| || :.:.|.|:...|
  Rat   378 ---DRSFLFVVRHNPTETILFMGQLMEP 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 111/410 (27%)
Serpine1NP_036752.2 serpin 29..402 CDD:422956 111/414 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

Return to query results.
Submit another query.