DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Serpina3f

DIOPT Version :9

Sequence 1:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001028507.2 Gene:Serpina3f / 238393 MGIID:2182838 Length:445 Species:Mus musculus


Alignment Length:460 Identity:127/460 - (27%)
Similarity:195/460 - (42%) Gaps:122/460 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GRNQFARNLIDVITK-DALQQS----------------KDPHINTVFSPASVQSALTLAFMGASG 54
            |||...|.:.:.||. |:|..:                |:|..|.||||.|:.:||.|..:||..
Mouse    17 GRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDENVVFSPFSICTALALLSLGAKS 81

  Fly    55 STAEELRNGLQLG----------------------PGDRHHIALNFGEFWRTSCNYGDRGPVLKS 97
            :|.:|:..||:..                      ||::..|:..                    
Mouse    82 NTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTG-------------------- 126

  Fly    98 VNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGATQLINDWVEQETEHKITNLLQSDAVN 162
             :.|::...|::|.||.|.|...:|::|....|.....||:||||:|...|:.||..|: || ::
Mouse   127 -SALFIEKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKIKELI-SD-LD 188

  Fly   163 NETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQVNMM--------YQEDKFRFAELPQ 219
            ..|..:|:|.:||||||:.||.|:.|....|::|.:..|:|.||        |..|:       :
Mouse   189 KRTLMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTPYFRDE-------E 246

  Fly   220 LKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLADIDAALTLQDV-EIFLPRMCIEYD 283
            |....|:|.|. .|...:.:||:: ..:|::|..|....|.:...:|..:.: |:.||:..|..|
Mouse   247 LSCTVVELKYT-GNASAMFILPDQ-GKMQQVEASLQPETLRNWKDSLKPRLINELCLPKFSISTD 309

  Fly   284 VDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGYIDVNEAGSEAAA----------- 337
            ..|:.:|.:|||.|:||.:|.|..: |.....:.|...|:..:||.|.|:||||           
Mouse   310 YSLEHILPELGIRELFSTQADLSAI-TGTKDLRTSQVVHKAVLDVAETGTEAAAGTGYQNLQCCQ 373

  Fly   338 --VSFMKIVPMMLNMNKKLFKADHPFVFYI--RNPQAVFFAGRFSNPKSGSGSGEEGLSREGFDA 398
              :..|||.            .|.||:..|  .|.....|..:.|||:|              |.
Mouse   374 GVIYSMKIY------------FDRPFLMIISDTNTHIALFMAKVSNPES--------------DE 412

  Fly   399 NMYNV 403
            |..||
Mouse   413 NFLNV 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 119/432 (28%)
Serpina3fNP_001028507.2 alpha-1-antitrypsin_like 40..405 CDD:239011 111/409 (27%)
RCL 357..382 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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