DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Serpina3m

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_033279.2 Gene:Serpina3m / 20717 MGIID:98378 Length:418 Species:Mus musculus


Alignment Length:374 Identity:114/374 - (30%)
Similarity:185/374 - (49%) Gaps:40/374 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGL-----QLGPGDRHHIALNFGEFWRTSCN 87
            |:|..|.||||.|:.:||.|..:||.|:|.||:..||     :....|.|.   .||...:....
Mouse    65 KNPDKNIVFSPLSISAALALVSLGAKGNTLEEILEGLKFNLTETSEADIHQ---GFGHLLQRLSQ 126

  Fly    88 YGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGATQLINDWVEQETEHKI 152
            ..|:..: ...|.:::...|::|.||:|.....:|::|....|.....||:||||:|..:|:..|
Mouse   127 PEDQDQI-NIGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEATKLINDYVSNQTQGMI 190

  Fly   153 TNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQVNMMYQEDKFRFAEL 217
            ..|:..  :::.|..:|:|.:||||||:..|.|:.|....|::|....|:|.||    |.:|...
Mouse   191 KKLISE--LDDRTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSVKVPMM----KMKFLTT 249

  Fly   218 -----PQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLADIDAALTLQDV-EIFLP 276
                 .:|....::|.|. .|...|.:||:: ..:|::|..|....|.....:|..:.: |::||
Mouse   250 RHFRDEELSCSVLELKYT-GNASALFILPDQ-GRMQQVEASLQPETLRKWWKSLKTRKIGELYLP 312

  Fly   277 RMCIEYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGYIDVNEAGSEAAAVS-F 340
            :..|..|.:||.:|.:|||.|:||.:|.|.|: |......:|...|:..:||.|.|:||||.: |
Mouse   313 KFSISTDYNLKDILPELGIKEIFSKQADLSGI-TGTKDLSVSQVVHKAVLDVAETGTEAAAATGF 376

  Fly   341 M------KIVPMMLNMNKKLFKADHPFVFYIRNP--QAVFFAGRFSNPK 381
            :      ::..|.:..|:       ||:..|.:.  |...|..:.:|||
Mouse   377 IFGFRSRRLQTMTVQFNR-------PFLMVISHTGVQTTLFMAKVTNPK 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 111/371 (30%)
Serpina3mNP_033279.2 serpinA3_A1AC 37..418 CDD:381019 112/372 (30%)
RCL 367..392 7/24 (29%)

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