DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Serpina3k

DIOPT Version :9

Sequence 1:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_035588.2 Gene:Serpina3k / 20714 MGIID:98377 Length:418 Species:Mus musculus


Alignment Length:370 Identity:113/370 - (30%)
Similarity:183/370 - (49%) Gaps:33/370 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLG-----PGDRHHIALNFGEFWRTSCN 87
            |:...|.||||.|:.:||.|..:||.|.|.||:..||:..     ..|.|.   .||...::...
Mouse    66 KNQDKNIVFSPLSISAALALVSLGAKGKTMEEILEGLKFNLTETPEADIHQ---GFGNLLQSLSQ 127

  Fly    88 YGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGATQLINDWVEQETEHKI 152
            ..|:..: ...|.:::...|::|.||:|.....:|::|....|.....|..||||:|..:|:..|
Mouse   128 PEDQDQI-NIGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEAKNLINDYVSNQTQGMI 191

  Fly   153 TNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQVNMMYQE----DKFR 213
            ..|:..  :::.|..:|:|.:||||||:..|.|:.|....|::|....|:|.||..:    ..||
Mouse   192 KKLISE--LDDGTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSVKVPMMKMKLLTARHFR 254

  Fly   214 FAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLADIDAAL-TLQDVEIFLPR 277
            ..|   |....::|.|. .|...|::||:: ..:|::|..|....|......| :.|..|:.||:
Mouse   255 DEE---LSCSVLELKYT-GNASALLILPDQ-GRMQQVEASLQPETLRKWRKTLFSSQIEELNLPK 314

  Fly   278 MCIEYDVDLKQ-VLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGYIDVNEAGSEAAAVSFM 341
            ..|..|..|:: ||.::||.|||:::|.|.|: |......:|...|:..:||.|.|:||||.:  
Mouse   315 FSIASDYRLEEDVLPEMGIKEVFTEQADLSGI-TEAKKLSVSQVVHKAVLDVAETGTEAAAAT-- 376

  Fly   342 KIVPMMLNMNKKLFKA---DHPF--VFYIRNPQAVFFAGRFSNPK 381
               .::..:.|.:..|   :.||  |.|..:.|::.|..:.:|||
Mouse   377 ---GVIGGIRKAVLPAVCFNRPFLIVIYHTSAQSILFMAKVNNPK 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 110/364 (30%)
Serpina3kNP_035588.2 SERPIN 57..417 CDD:214513 110/367 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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