DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Serpina1c

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_033271.1 Gene:Serpina1c / 20702 MGIID:891969 Length:413 Species:Mus musculus


Alignment Length:382 Identity:118/382 - (30%)
Similarity:197/382 - (51%) Gaps:23/382 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NQFARNLIDV---ITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQL---- 66
            ::.|.||.|.   :.::.:.||...  |..|||.|:.:|..:..:|:.|.|..::..|||.    
Mouse    42 HEIATNLGDFAISLYRELVHQSNTS--NIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQ 104

  Fly    67 -GPGDRHHIALNFGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRF 130
             ...|.|.   :|....:| .|..|....|.:.|.|:||:.|:|:.:|.|.|.:.:|::..:..|
Mouse   105 TSEADIHK---SFQHLLQT-LNRPDSELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAEVFSVNF 165

  Fly   131 ADSEGATQLINDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHV 195
            |:||.|.::|||:||:.|:.||...::.  ::.:|...|.|.:.|||||:|||.||.|....|||
Mouse   166 AESEEAKKVINDFVEKGTQGKIAEAVKK--LDQDTVFALANYILFKGKWKKPFDPENTEEAEFHV 228

  Fly   196 DRDTHVQVNMMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLA 260
            |..|.|:|.||.............|.:..:.:.| ..|...:.|||:: ..:|.|||.|:...::
Mouse   229 DESTTVKVPMMTLSGMLDVHHCSTLSSWVLLMDY-AGNATAVFLLPDD-GKMQHLEQTLSKELIS 291

  Fly   261 DIDAALTLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGY 325
            ........:..:|..||:.|..:.:||.:::.||||.:|::.|.|.|:....:..|:|.|.|:..
Mouse   292 KFLLKRPRRLAQIHFPRLSISGEYNLKTLMSPLGITRIFNNGADLSGITEENAPLKLSQAVHKAV 356

  Fly   326 IDVNEAGSEAAAVSFMKIVPMMLNMNKKLFKADHPFVFYI--RNPQAVFFAGRFSNP 380
            :.::|.|:||||.:.:..||..:   ..:.:.||||:|.|  .:.|:..|.|:..:|
Mouse   357 LTMDETGTEAAAATVLLAVPYSM---PPIVRFDHPFLFIIFEEHTQSPLFVGKVVDP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 117/380 (31%)
Serpina1cNP_033271.1 serpinA1_A1AT 44..412 CDD:381012 118/380 (31%)

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