DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and Serpina1b

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_033270.3 Gene:Serpina1b / 20701 MGIID:891970 Length:413 Species:Mus musculus


Alignment Length:382 Identity:124/382 - (32%)
Similarity:201/382 - (52%) Gaps:23/382 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NQFARNLIDV---ITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQL---- 66
            ::.|.||.|.   :.::.:.||...  |..|||.|:.:|..:..:|:.|.|..::..|||.    
Mouse    42 HEIATNLGDFAISLYRELVHQSNTS--NIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQ 104

  Fly    67 -GPGDRHHIALNFGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRF 130
             ...|.|.   :|....:| .|..|....|.:.|.|:||:.|:|:.:|.|.|.:.:|::..:..|
Mouse   105 TSEADIHK---SFQHLLQT-LNRPDSELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAEVFSVNF 165

  Fly   131 ADSEGATQLINDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHV 195
            |:||.|.::|||:||:.|:.||...::.  ::.:|...|.|.:.|||||:|||.||.|....|||
Mouse   166 AESEEAKKVINDFVEKGTQGKIVEAVKE--LDQDTVFALANYILFKGKWKKPFDPENTEEAEFHV 228

  Fly   196 DRDTHVQVNMMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLA 260
            |:.|.|:|.||.............|.:..:.:.| ..|...:.||| |...:|.|||.||...::
Mouse   229 DKSTTVKVPMMMLSGMLDVHHCSILSSWVLLMDY-AGNASAVFLLP-EDGKMQHLEQTLNKELIS 291

  Fly   261 DIDAALTLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGY 325
            .|......:.|:|.:||:.|..|.:||.:::.||||.:|::.|.|.|:....:..|:|.|.|:..
Mouse   292 KILLNRRRRLVQIHIPRLSISGDYNLKTLMSPLGITRIFNNGADLSGITEENAPLKLSKAVHKAV 356

  Fly   326 IDVNEAGSEAAAVSFMKIVPMMLNMNKKLFKADHPFVFYI--RNPQAVFFAGRFSNP 380
            :.::|.|:||||.:..:.|||.:   ..:.:.||||:|.|  .:.|:..|.|:..:|
Mouse   357 LTIDETGTEAAAATVFEAVPMSM---PPILRFDHPFLFIIFEEHTQSPIFVGKVVDP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 123/380 (32%)
Serpina1bNP_033270.3 serpinA1_A1AT 44..412 CDD:381012 124/380 (33%)
RCL 368..387 4/21 (19%)

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