DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and srp-7

DIOPT Version :10

Sequence 1:NP_610245.2 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001122924.1 Gene:srp-7 / 179195 WormBaseID:WBGene00005648 Length:373 Species:Caenorhabditis elegans


Alignment Length:393 Identity:106/393 - (26%)
Similarity:179/393 - (45%) Gaps:41/393 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEPQEGRNQFARNLID----VITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELR 61
            ||:|:|......::..|    ::.:..:.:|      ..|||.|:..||:|..:.|.|.|.:::|
 Worm     1 MSDPKENMALLLQSETDFGLGLLRQQNISES------LAFSPLSIALALSLVHVAAKGETRDQIR 59

  Fly    62 NGLQLGPGD---RHHIALNFGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQS 123
            ..|..|..|   ..|.| |..    .:....:||..:|..|.::.....::...:.:.....:.:
 Worm    60 EALVKGSTDEQLEQHFA-NIS----AALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNA 119

  Fly   124 KAEATRFADSEGATQLINDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETT 188
            .|.:..|.:.|...:.||::|.:.|...|..::.||::|::..|:|.|.||||..||..|..::|
 Worm   120 GASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDST 184

  Fly   189 SIDHFHVDRDTHVQVNMMYQEDKFR-FAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQ 252
            ....|....|:..:::.::.....| :||..|.  :.:.|||..:...:.|.||....||.|   
 Worm   185 FKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLSLPYKDNTFALTIFLPKTRFGLTE--- 244

  Fly   253 QLNTVDLADIDAAL---TLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKL----DGLFT 310
            .|.|:|.|.|...|   :...|.:.:|:..||..:.|::.|..|||.:.|.:.|.|    |||: 
 Worm   245 SLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNMADGLY- 308

  Fly   311 SQSGQKISAARHRGYIDVNEAGSEAAAVSFMKI---VPMMLNMNKKLFKADHPFVFYIRNPQAVF 372
                  :|...|:..|:|:|.|::|||.:.:.|   ..|.:....|.|.|||||.|.:.......
 Worm   309 ------VSKVTHKALIEVDEEGTKAAAATTVSISLKSAMFVMEEPKDFTADHPFFFVLSKDNHPL 367

  Fly   373 FAG 375
            |.|
 Worm   368 FVG 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_610245.2 serpin42Dd-like_insects 7..380 CDD:381070 102/387 (26%)
srp-7NP_001122924.1 serpinL_nematode 14..372 CDD:381047 102/380 (27%)

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