DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Dc and srp-7

DIOPT Version :9

Sequence 1:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001122924.1 Gene:srp-7 / 179195 WormBaseID:WBGene00005648 Length:373 Species:Caenorhabditis elegans


Alignment Length:393 Identity:106/393 - (26%)
Similarity:179/393 - (45%) Gaps:41/393 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEPQEGRNQFARNLID----VITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELR 61
            ||:|:|......::..|    ::.:..:.:|      ..|||.|:..||:|..:.|.|.|.:::|
 Worm     1 MSDPKENMALLLQSETDFGLGLLRQQNISES------LAFSPLSIALALSLVHVAAKGETRDQIR 59

  Fly    62 NGLQLGPGD---RHHIALNFGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQS 123
            ..|..|..|   ..|.| |..    .:....:||..:|..|.::.....::...:.:.....:.:
 Worm    60 EALVKGSTDEQLEQHFA-NIS----AALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNA 119

  Fly   124 KAEATRFADSEGATQLINDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETT 188
            .|.:..|.:.|...:.||::|.:.|...|..::.||::|::..|:|.|.||||..||..|..::|
 Worm   120 GASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDST 184

  Fly   189 SIDHFHVDRDTHVQVNMMYQEDKFR-FAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQ 252
            ....|....|:..:::.::.....| :||..|.  :.:.|||..:...:.|.||....||.|   
 Worm   185 FKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLSLPYKDNTFALTIFLPKTRFGLTE--- 244

  Fly   253 QLNTVDLADIDAAL---TLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKL----DGLFT 310
            .|.|:|.|.|...|   :...|.:.:|:..||..:.|::.|..|||.:.|.:.|.|    |||: 
 Worm   245 SLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNMADGLY- 308

  Fly   311 SQSGQKISAARHRGYIDVNEAGSEAAAVSFMKI---VPMMLNMNKKLFKADHPFVFYIRNPQAVF 372
                  :|...|:..|:|:|.|::|||.:.:.|   ..|.:....|.|.|||||.|.:.......
 Worm   309 ------VSKVTHKALIEVDEEGTKAAAATTVSISLKSAMFVMEEPKDFTADHPFFFVLSKDNHPL 367

  Fly   373 FAG 375
            |.|
 Worm   368 FVG 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 102/387 (26%)
srp-7NP_001122924.1 serpinL_nematode 14..372 CDD:381047 102/380 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm4841
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.030

Return to query results.
Submit another query.