DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and srp-1

DIOPT Version :9

Sequence 1:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_503315.1 Gene:srp-1 / 178585 WormBaseID:WBGene00005642 Length:366 Species:Caenorhabditis elegans


Alignment Length:379 Identity:92/379 - (24%)
Similarity:181/379 - (47%) Gaps:36/379 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QFARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGPGDRHHI 74
            ||...|:..:|.|.|..       .||||.|:..:|.|..:||.|.|..::||.:..|..|...|
 Worm    14 QFGIKLLSDLTSDQLTP-------CVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFI 71

  Fly    75 A-LNF-GEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGAT 137
            . .:| .:...:|.|  |...::  .|||:|:....:...|.:...:.:.::.....|..|:.|.
 Worm    72 EHFSFINKLLNSSVN--DVETLI--ANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAA 132

  Fly   138 QLINDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQ 202
            :::|.::.:.|:.||.::::.|.: .:..|:|||.::|:|.|::.|.....|  :|.:....:..
 Worm   133 KIMNQFISESTKGKIPDMIKPDNL-KDVDAILINAIFFQGDWRRKFGEPAES--NFSISATENRL 194

  Fly   203 VNMM-------YQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLA 260
            |.|:       |.:|.         :.:.:.:|:...:....|.||.....|.|..:.||.....
 Worm   195 VPMLRETRDYFYNKDD---------EWQVIGIPFKDKSAWFAIFLPTRRFALAENLKSLNAAKFH 250

  Fly   261 DIDAALTLQDVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGY 325
            ::...:..:.:.:..|:..::|.::||..|.:.|:.|:|:::|.|.|:   ..|.::::|.|:..
 Worm   251 NLINNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGI---GPGLQLASATHQAL 312

  Fly   326 IDVNEAGSEAAAVSFMKIVPMMLNMNKKL-FKADHPFVFYIRNPQAVFFAGRFS 378
            |:|::.|:.|||.:..||.....:.::.| .:.||||:|.|....:..|.|.::
 Worm   313 IEVDQVGTRAAAATEAKIFFTSASSDEPLHIRVDHPFLFAIIKDNSPLFLGTYT 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 92/376 (24%)
srp-1NP_503315.1 serpinL_nematode 11..365 CDD:381047 92/376 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm4841
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.930

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