DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Dc and serpinb4

DIOPT Version :9

Sequence 1:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_002936465.2 Gene:serpinb4 / 100490314 XenbaseID:XB-GENE-5787878 Length:392 Species:Xenopus tropicalis


Alignment Length:421 Identity:121/421 - (28%)
Similarity:204/421 - (48%) Gaps:70/421 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEPQEGRNQFARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELR---- 61
            ||...:..::|:.:|...:.|:..::      |.:|||.|:.||:.|..:|:.|.||.|:.    
 Frog     1 MSSLSKSFSEFSLDLCKELKKNPEKK------NILFSPLSICSAMGLVLLGSKGDTAAEIEKVFH 59

  Fly    62 ---------------------NGLQL----------GPGDRHHIALNFGEFWRTSCNYGDRGPVL 95
                                 .|:.|          .|.|.:.:::....:...|..:.::  .|
 Frog    60 FPAAAGSRSSKPSCQQQTCQAQGVHLLFKDLFSTLNKPNDHYELSIANRAYGEKSFPFSEQ--YL 122

  Fly    96 KSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGATQLINDWVEQETEHKITNLLQSDA 160
            ..:.:|| |.:||        :|| |::||        :...|.||.|||.:|:.||.||....:
 Frog   123 LCIEQLY-NATLE--------SVD-FKTKA--------DDVIQQINAWVESKTKGKIQNLFAKGS 169

  Fly   161 VNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQVNMMYQEDKFRFAELPQLKARAV 225
            :::.|:..|:|.:||||.|:|.|..|.|:...|.::::....|.||.|:.|::....|:||.|.:
 Frog   170 LDSTTALALVNAVYFKGSWKKQFKKENTTDAPFFLNKNDKTSVKMMSQKGKYKLGSNPELKCRIL 234

  Fly   226 QLPYDYSNIHMLILLPNEVNGLQELEQQL---NTVDLADIDAALTLQDVEIFLPRMCIEYDVDLK 287
            :|||: ....|.|:||::::||.|||..|   ....|.|:.....:| |.:.||:........|.
 Frog   235 KLPYE-EGFSMKIILPDDIDGLAELETHLTYETFTKLMDLQRTREVQ-VVVKLPQFKFGETYSLT 297

  Fly   288 QVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGYIDVNEAGSEAAAVSFMKIVPMMLNMNK 352
            :||..:|:|..|.. |.|.|: :.::|..||...|:.||:|||.|:||||.:.:.|......:..
 Frog   298 EVLQSMGMTSAFHG-ANLSGI-SDKAGLAISTVVHKSYIEVNEEGTEAAAATGIGITVTSAPLPP 360

  Fly   353 KLFKADHPFVFYIR--NPQAVFFAGRFSNPK 381
            :.|..|.||:|.|.  :.:::.|.|||:.|:
 Frog   361 QEFIVDRPFLFCIEHISTKSLLFYGRFTFPE 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 116/409 (28%)
serpinb4XP_002936465.2 serpinB 10..387 CDD:381072 116/406 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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