DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and SERPIN1

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001320925.1 Gene:SERPIN1 / 841182 AraportID:AT1G47710 Length:418 Species:Arabidopsis thaliana


Alignment Length:392 Identity:113/392 - (28%)
Similarity:181/392 - (46%) Gaps:45/392 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QFALCLHDH-LCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLEAQQ--VA 73
            |.::.|..| :...|...|:|:||.||::..:::..|::  .||..::...|:|...:...  .:
plant    39 QVSMNLAKHVITTVSQNSNVIFSPASINVVLSIIAAGSA--GATKDQILSFLKFSSTDQLNSFSS 101

  Fly    74 ESFGVVLK--SYEQCQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGSEQAASI--IN 134
            |....||.  |......|.:|||.::.|.|.....|..:||..:::...:.||.|:....|  :|
plant   102 EIVSAVLADGSANGGPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQSKAVEVIAEVN 166

  Fly   135 KWVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGSD--------- 190
            .|.|.:||.||.:::........::|...|.::|||.|:..|:|..|:|.:|...|         
plant   167 SWAEKETNGLITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFM 231

  Fly   191 RPTRVRMMHVCENFFFAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEVVS 255
            ...:.:.:...:.|....||..:....|      ..:|...|||..:.       |||:..::||
plant   232 TSKKKQYVSAYDGFKVLGLPYLQGQDKR------QFSMYFYLPDANNG-------LSDLLDKIVS 283

  Fly   256 SAMNLE--------KV-DVKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEE---SLF 308
            :...|:        || :.|||.|...|..:.|.||..:|:...|||:..|..|::|.|   :|.
plant   284 TPGFLDNHIPRRQVKVREFKIPKFKFSFGFDASNVLKGLGLTSPFSGEEGLTEMVESPEMGKNLC 348

  Fly   309 VSQIVHKAFIEINEVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAIKDNTHG-LLFAGH 372
            ||.|.|||.||:||.|||||||:|.|...|.:...:.... |.|:.||...:.:|..| :||.|.
plant   349 VSNIFHKACIEVNEEGTEAAAASAGVIKLRGLLMEEDEID-FVADHPFLLVVTENITGVVLFIGQ 412

  Fly   373 FI 374
            .:
plant   413 VV 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 113/389 (29%)
SERPIN1NP_001320925.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.070

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