DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Db and Serpina7

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_112390.1 Gene:Serpina7 / 81806 RGDID:619833 Length:426 Species:Rattus norvegicus


Alignment Length:382 Identity:109/382 - (28%)
Similarity:180/382 - (47%) Gaps:40/382 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFG--GLEAQQVAES 75
            ||..|:..|...:..|||.:||:||..:.|||..|:  ||:|..::.|.|.|.  ....:::.:.
  Rat    60 FAFRLYRKLSVENPDLNIFFSPVSISAALAMLSFGS--GSSTQTQILEVLGFNLTDTPVKELQQG 122

  Fly    76 FGVVLKSYEQCQV--------LKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGSEQAAS- 131
            |..::     |.:        |:|.|.:::.:.|:...:|...::..:.::....||.:..||. 
  Rat   123 FQHLI-----CSLNFPNNELELQMGNAVFIGQQLKPLAKFLDDVKTLYETEVFSTDFSNVSAAQH 182

  Fly   132 IINKWVESQTNNLIKDIIGPRVLTKDSRL----CLVNGIHFKGEWSISFNEKETREEDFFGSDRP 192
            .||.:||.||..   .|:|   |.:|.:|    .|||.||||.:|:..|...:|.|...|..|:.
  Rat   183 EINSYVEKQTKG---KIVG---LIQDLKLNIIMILVNYIHFKAQWANPFRVSKTEESSNFSVDKS 241

  Fly   193 TRVR--MMHVCENFFFAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEVVS 255
            |.|:  |||..|.::..|......|.|:|:|||..||:.: ||.| .::..:|..:|..:|:..:
  Rat   242 TTVQVPMMHQLEQYYHYVDVELNCTVLQMDYSANALALFV-LPKE-GHMEWVEAAMSSKTLKKWN 304

  Fly   256 SAMNLEKVDVKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEI 320
            ..:....|::.:|.|:.....:|...|..|||...|:..|:..| :..:..|.:|...|||.:.|
  Rat   305 HLLQKGWVELFVPKFSISATYDLGSTLQKMGMRDAFAESADFPG-ITKDNGLKLSYAFHKAVLHI 368

  Fly   321 NEVGTEAAAATAAVATFRSMPARQGPP--KVFHANRPFFYAI-KDNTHGLLFAGHFI 374
            .|.||:..|:..|    .|:...:..|  .|...:|.|...| :..|..:||.|..:
  Rat   369 GEEGTKEGASPEA----GSLDQPEVAPLHAVIRLDRTFLLMILEKRTRSVLFLGKVV 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 109/379 (29%)
Serpina7NP_112390.1 serpinA7_TBG 48..425 CDD:381023 109/382 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.100

Return to query results.
Submit another query.