DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Serpina3a

DIOPT Version :10

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001161177.1 Gene:Serpina3a / 74069 MGIID:1921319 Length:422 Species:Mus musculus


Alignment Length:366 Identity:100/366 - (27%)
Similarity:186/366 - (50%) Gaps:33/366 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLEAQQ--VAES 75
            ||..|:..|...:...||::|||||..:.|::.:|..:.  |.:|:.|||:|...|..:  :.::
Mouse    56 FAFSLYKKLALKNPHKNIVFSPLSISAALALMSLGAKDN--TLEEILEGLKFNLTETPEADIHQN 118

  Fly    76 FG----VVLKSYEQCQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFG-SEQAASIINK 135
            ||    ::::...|.|: ...|.|::.|.||:..:|.......::::....||. ..:|..:||.
Mouse   119 FGHLLQMLIQPENQVQI-NAGNALFIDKHLQILTEFKEKARALYKAEAFTADFQLPREATKLIND 182

  Fly   136 WVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGS-----DRPTRV 195
            :|..||...||:::..  |.:::.:.|||.::|:|.|:::|:.::|    |.|:     .|...|
Mouse   183 YVRKQTQGKIKELVSD--LHRNTSMALVNFLNFQGFWNVTFDPEDT----FLGNFTLDRKRTVNV 241

  Fly   196 RMMHVCE---NFFFAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEVVSSA 257
            .||...|   |:|..  ...::|.:.:||.. |.:.:.:|||: ..:..:|..|...||.....:
Mouse   242 PMMKTEELTTNYFRD--EEMQSTVMELNYIG-NASFLFILPDQ-GRIQHVEDSLQPQSLRKWRKS 302

  Fly   258 MNLEKVD-VKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEIN 321
            :....:| :.:|.|:......|:.:|..:|:..:||.||:|.| :...:::.|||::|:|.:::.
Mouse   303 LRPRMLDELSLPKFSLSQDYNLNDILPELGIKEVFSTQADLSG-ITGAKNIRVSQMIHQAALDVT 366

  Fly   322 EVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAIKD 362
            |..|||...|.|...|:|...:   .|:...:|.|.|.|.|
Mouse   367 ETHTEADVITIARYNFQSAKIK---AKIVKVDREFLYLILD 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 serpin42Da-like 9..372 CDD:381065 100/366 (27%)
Serpina3aNP_001161177.1 serpinA3_A1AC 39..419 CDD:381019 100/366 (27%)

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