DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Serpinb2

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_067728.1 Gene:Serpinb2 / 60325 RGDID:621823 Length:416 Species:Rattus norvegicus


Alignment Length:424 Identity:119/424 - (28%)
Similarity:200/424 - (47%) Gaps:66/424 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEFAQGLEQFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMG----TSEGSATAKEMDE---- 60
            ||.:.....|||.|...:.::::..||..||.||..:.|::.:|    |.|..|.....|:    
  Rat     2 EELSMANTMFALNLLKQIEQSNSTQNIFISPWSISSTLAIVFLGAQANTEEQMAKVLNFDKIGSY 66

  Fly    61 -----------GLRFGG-----------LEAQ---QVAESFGVV--------LKSYEQCQVLKMA 92
                       |..|..           |:||   ::..:|..:        |..|    :|:.|
  Rat    67 DLTPGNPENFHGCDFAQHIQRDNYPVAILQAQARDKIHSAFSSLSSTINTPRLGDY----LLESA 127

  Fly    93 NGLYVMKGLQVDEQFGHILEQKFRSKPMEIDF--GSEQAASIINKWVESQTNNLIKDIIGPRVLT 155
            |.|:..|..:..|::....::.:.::|..:||  .:.:|...||.||::||...|.:::....:.
  Rat   128 NKLFGEKSARFKEEYIQRCKKYYSTEPEAVDFLECANEARKKINSWVKTQTKGEIPNLLPEGSVD 192

  Fly   156 KDSRLCLVNGIHFKGEWSISFNEKETREEDF---FGSDRPTRVRMMHVCENFFFAVLPMFEATAL 217
            :|:::.|||.|:|||.|...|.::......|   ....:|  |:||::.|......:...:...|
  Rat   193 EDTKMVLVNTIYFKGRWKTPFQKRLNGLYPFRVNLNESKP--VQMMYLREKLNIGYIKDLKTQIL 255

  Fly   218 RMNYSACNLAMIILLPDE-KSNLTSLEKKLSDISLEVVSSAMNLEKVD-----VKIPSFTAEFQQ 276
            .:.|.. |::|.:||||| :.:.|.||....:|:.:..:..::.|.:|     |.||.|......
  Rat   256 ELPYIG-NISMFLLLPDEIEDSSTGLEMLEREINFDNFNKWISKETLDEDDVLVYIPKFKLAQNY 319

  Fly   277 ELSQVLMLMGMNRIFS-GQAELGGMLQSEESLFVSQIVHKAFIEINEVGTEAAAATAAVATFRSM 340
            ||..:|..|||...|: |:|:..||.:|.: ||:|::.|:|.:::||.||.||..|.||.|.|: 
  Rat   320 ELKPILQRMGMEDAFNKGKADFSGMSESND-LFLSEVFHQATVDVNEEGTVAAGGTGAVMTGRT- 382

  Fly   341 PARQGPPKVFHANRPFFYAIKDN-THGLLFAGHF 373
              ..|.|: |.|:.||.:.|.:| |..:||.|.|
  Rat   383 --GHGGPQ-FVADHPFLFFIMNNITRTILFVGRF 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 116/414 (28%)
Serpinb2NP_067728.1 serpinB2_PAI-2 2..416 CDD:381029 119/424 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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