DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Db and Serpinb2

DIOPT Version :10

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_067728.1 Gene:Serpinb2 / 60325 RGDID:621823 Length:416 Species:Rattus norvegicus


Alignment Length:424 Identity:119/424 - (28%)
Similarity:200/424 - (47%) Gaps:66/424 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEFAQGLEQFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMG----TSEGSATAKEMDE---- 60
            ||.:.....|||.|...:.::::..||..||.||..:.|::.:|    |.|..|.....|:    
  Rat     2 EELSMANTMFALNLLKQIEQSNSTQNIFISPWSISSTLAIVFLGAQANTEEQMAKVLNFDKIGSY 66

  Fly    61 -----------GLRFGG-----------LEAQ---QVAESFGVV--------LKSYEQCQVLKMA 92
                       |..|..           |:||   ::..:|..:        |..|    :|:.|
  Rat    67 DLTPGNPENFHGCDFAQHIQRDNYPVAILQAQARDKIHSAFSSLSSTINTPRLGDY----LLESA 127

  Fly    93 NGLYVMKGLQVDEQFGHILEQKFRSKPMEIDF--GSEQAASIINKWVESQTNNLIKDIIGPRVLT 155
            |.|:..|..:..|::....::.:.::|..:||  .:.:|...||.||::||...|.:::....:.
  Rat   128 NKLFGEKSARFKEEYIQRCKKYYSTEPEAVDFLECANEARKKINSWVKTQTKGEIPNLLPEGSVD 192

  Fly   156 KDSRLCLVNGIHFKGEWSISFNEKETREEDF---FGSDRPTRVRMMHVCENFFFAVLPMFEATAL 217
            :|:::.|||.|:|||.|...|.::......|   ....:|  |:||::.|......:...:...|
  Rat   193 EDTKMVLVNTIYFKGRWKTPFQKRLNGLYPFRVNLNESKP--VQMMYLREKLNIGYIKDLKTQIL 255

  Fly   218 RMNYSACNLAMIILLPDE-KSNLTSLEKKLSDISLEVVSSAMNLEKVD-----VKIPSFTAEFQQ 276
            .:.|.. |::|.:||||| :.:.|.||....:|:.:..:..::.|.:|     |.||.|......
  Rat   256 ELPYIG-NISMFLLLPDEIEDSSTGLEMLEREINFDNFNKWISKETLDEDDVLVYIPKFKLAQNY 319

  Fly   277 ELSQVLMLMGMNRIFS-GQAELGGMLQSEESLFVSQIVHKAFIEINEVGTEAAAATAAVATFRSM 340
            ||..:|..|||...|: |:|:..||.:|.: ||:|::.|:|.:::||.||.||..|.||.|.|: 
  Rat   320 ELKPILQRMGMEDAFNKGKADFSGMSESND-LFLSEVFHQATVDVNEEGTVAAGGTGAVMTGRT- 382

  Fly   341 PARQGPPKVFHANRPFFYAIKDN-THGLLFAGHF 373
              ..|.|: |.|:.||.:.|.:| |..:||.|.|
  Rat   383 --GHGGPQ-FVADHPFLFFIMNNITRTILFVGRF 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 serpin42Da-like 9..372 CDD:381065 115/416 (28%)
Serpinb2NP_067728.1 serpinB2_PAI-2 2..416 CDD:381029 119/424 (28%)

Return to query results.
Submit another query.