DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Db and serpind1

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001015716.1 Gene:serpind1 / 548433 XenbaseID:XB-GENE-6085731 Length:484 Species:Xenopus tropicalis


Alignment Length:417 Identity:113/417 - (27%)
Similarity:192/417 - (46%) Gaps:75/417 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKDEEFAQG-----------LEQFALCLHD---HLCRA-----SAGLNIIYSPLSIHISAAMLRM 46
            :||.|..||           :::.::...:   :|.||     .|..||:.:|:.|..:.|.:.:
 Frog    89 IKDSESQQGNIYELFQGKTRVQRLSIINANFGFNLYRAIKNNTDASDNILLAPVGISTAMATISL 153

  Fly    47 GTSEGSATAKEMDE-----GLR-----------------FGGLEAQQVAESFGVVLKSYEQCQVL 89
            || :|.|    :|:     |.:                 |..|..:....:||..|:|       
 Frog   154 GT-KGQA----LDQVLFTLGFKNFINASSKYEILTLHNVFRKLTHRLFRRNFGYTLRS------- 206

  Fly    90 KMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGSEQAASIINKWVESQTNNLIKDI---IGP 151
              .|.:||.|...:.|.|.:.|:..:.::...:||||:...:..||.::..|..|||:.   :.|
 Frog   207 --VNDIYVKKDFVIREPFKNNLKNYYFAEAQMVDFGSKDFLTKANKRIQQLTKGLIKEALTNVDP 269

  Fly   152 RVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGSDRP-TRVRMMHVCENFFFAVLPMFEAT 215
            .:|     :.|||.|:|||.|...|..:.|:..:|..:::. .:|.||....||..|..|..:..
 Frog   270 ALL-----MLLVNCIYFKGTWENKFPVEYTQNMNFRLNEKELVKVPMMKTKGNFLVAADPELDCA 329

  Fly   216 ALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEVVSSAMNLEKVDVKIPSFTAEFQQELSQ 280
            .|::.|.. |::|:|:||.:.|.:..|||::|...:|...:.|.....:|.:|.|..|....|.:
 Frog   330 VLQLPYVG-NISMLIVLPHKLSGMKLLEKQISPQVVERWQNIMTNRTREVFLPRFKLEKSYNLQE 393

  Fly   281 VLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEINEVGTEAAAATAAVATFRSMPARQG 345
            ||..||:..:|: ..:..|:  |::::.:....|:..|.:||.||||||.|.......|..||  
 Frog   394 VLSNMGVTDLFT-HGDFSGV--SDKNMNIGLFQHQGTITVNEEGTEAAAVTVVGFMPLSTQAR-- 453

  Fly   346 PPKVFHANRPFFYAIKDN-THGLLFAG 371
                |.|:|||.:.|.:: |:.|:|.|
 Frog   454 ----FVADRPFLFLIYEHRTNCLIFMG 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 108/395 (27%)
serpind1NP_001015716.1 serpinD1_HCF2 38..484 CDD:381004 113/417 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.