DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Spn42Dd

DIOPT Version :10

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster


Alignment Length:365 Identity:116/365 - (31%)
Similarity:194/365 - (53%) Gaps:20/365 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLEAQQVAESFGVV-- 79
            ::..|.::....|::.||:||....:|:.|| :||| ||||:...|.....:.:.||..:|.:  
  Fly    21 IYQLLSKSHTNQNLVVSPVSIETILSMVFMG-AEGS-TAKELQSALGLPSEDKEAVAARYGALLN 83

  Fly    80 -LKSYEQCQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDF-GSEQAASIINKWVESQTN 142
             |:..|:..:||:||.:||.....:::.:...:.:.|:|:...|.. ....||..||:||..||:
  Fly    84 DLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAAERINQWVLDQTS 148

  Fly   143 NLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDF-FGSDRPTRVRMMHVCENFFF 206
            ..||.:|.|..:|.|.:..|||.|:|||:|...|:..:||...| ..:::...|:||.....|..
  Fly   149 GKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQMMAQMGTFRA 213

  Fly   207 AVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEVVSSAMNLEKVDVKIPSFT 271
            ......:|..:.:.|...||:|.|.||.|...|::||:|:...:..:|:     ::|.:|:|.|.
  Fly   214 NYFRDLDAQVIELPYLNSNLSMTIFLPREVEGLSALEEKIVGFARPLVA-----KEVYLKLPKFK 273

  Fly   272 AEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEINEVGTEAAAATAAVAT 336
            .||:.||.:.|..:|:..:|:.:::|.|:...:....|||:.||||:|:||.|.|||.||:...|
  Fly   274 IEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFLEVNEEGAEAAGATSVAVT 338

  Fly   337 FRSMPARQGPPKVFHANRPFFYAIKD-NTHGLLFAGHFIT 375
            .|:     |......|:.||.:.|:| ||  :.|.|..::
  Fly   339 NRA-----GFSTFLMADHPFAFVIRDANT--IYFQGRVVS 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 serpin42Da-like 9..372 CDD:381065 115/360 (32%)
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 116/365 (32%)

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