DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Spn55B

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster


Alignment Length:373 Identity:131/373 - (35%)
Similarity:212/373 - (56%) Gaps:11/373 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EFAQGLEQFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLEA 69
            |||:|..:|...|...|.......|:::||.||....|:...| |:|. ||.|:.:.|.|.....
  Fly     7 EFARGGARFTSELFQLLSAGGLKENVVFSPFSIQTCIALAFAG-SQGE-TADEIAKALHFVSNFP 69

  Fly    70 QQVAESFGVVLKSYEQCQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFG-SEQAASII 133
            .:||::|..||:.|....:|::||.|||.:|.|:...:...:::::.|:...|:|. ::.||..|
  Fly    70 PEVAQTFQFVLEKYRNSNLLRVANKLYVQEGKQLKPAYQSAIKEQYHSEAESINFALNDAAAQAI 134

  Fly   134 NKWVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFF--GSDRPTRVR 196
            |.||.::|...|.:::.....:.::||.|:|.:||||.|:..|:|:.| |||.|  |.:...::.
  Fly   135 NAWVNAKTQGKITELVSADSFSDNTRLVLLNALHFKGSWAHKFSEERT-EEDIFWVGEEEQVKIN 198

  Fly   197 MMHVCENFFFAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEVVSSAMNLE 261
            .|:....|.:........|||.|.|...:|:|.:|||.|::.:.:|.:||..::|..::..:.:|
  Fly   199 YMNQKAKFNYGFFEDLGCTALEMPYQDSDLSMFVLLPQERTGIYALAEKLKTVNLVDLADKLTVE 263

  Fly   262 KVDVKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEINEVGTE 326
            :|.||.|.|..::..||::.|..:|:.::|:.|||...:|:|.|.:|||:::|||.||:||.|||
  Fly   264 EVHVKFPKFKVDYSLELAEKLKQLGITKMFTDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTE 328

  Fly   327 AAAATAAVATFRSMPARQGPPKVFHANRPFFYAIKDNTHGLLFAGHFI 374
            |||||..:...|.|..    |..|.|:|||.|.|. |...:||||.|:
  Fly   329 AAAATGMIMMTRMMTF----PLQFQADRPFLYVIW-NKKNILFAGAFV 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 126/363 (35%)
Spn55BNP_524953.1 SERPIN 13..370 CDD:238101 126/364 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449372
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
109.900

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