DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Db and serpinb5

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001011282.1 Gene:serpinb5 / 496735 XenbaseID:XB-GENE-5802997 Length:379 Species:Xenopus tropicalis


Alignment Length:379 Identity:107/379 - (28%)
Similarity:192/379 - (50%) Gaps:37/379 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLEAQQVAE-SFG 77
            |:.:...||..||..|.:.|||.|..|.:::|.| |:|: ||.|:::.|.|     ::|.: .||
 Frog    12 AVDIFKKLCEKSATDNFVCSPLCISSSLSLIRKG-SQGN-TASELEKALHF-----EKVKDPDFG 69

  Fly    78 VVLKSYEQCQV-----LKMANGLYVMKGLQVDEQFGHILEQKFRSKPME---IDFGS--EQAASI 132
            ..|.|.:..::     ||:...:||...::..:.|.:..::.:   |:|   |||.|  |:|.:.
 Frog    70 FQLLSSDISKISSANSLKLLKRVYVDNSIECKKDFINSAKKPY---PLELETIDFKSQAEEARTQ 131

  Fly   133 INKWVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGSDRPTR-VR 196
            ||..|:..|:...:.::......:::::.::....|||:|..:||:.||:|.||..:.:.|: |:
 Frog   132 INSSVKELTDGNFETVLNEGSCDENTKIIMLGAASFKGKWVYTFNKSETKEMDFHINKKETKPVQ 196

  Fly   197 MMHVCENFFFAVLPMFEATALRMNYSACNLAMIILLP-DEKSNLTSLEKKLSDISLEVVS----- 255
            |||:........:...:...|.|.:.:.:.:|:|||| |.:.:.|.|:|...|::.|..:     
 Frog   197 MMHLEARLSIGYINELKTMVLEMPFQSKHFSMLILLPKDIEDDSTGLKKLEQDMTFEKYTHWTNP 261

  Fly   256 SAMNLEKVDVKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEI 320
            |.|...||.|.:|.|..|...:|..:|..:|:|..|:.:|.....:...:.:.:||.:.||.||:
 Frog   262 SMMANSKVKVSLPKFKMENSYDLKDMLKSLGINDAFNEEASDFSEMTESKGISISQAIQKACIEV 326

  Fly   321 NEVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAIKDN-THGLLFAGHF 373
            :|.|||:|..        ||..|....:.|.|:.||.|.::.| |..::..|.:
 Frog   327 DEDGTESADV--------SMERRLMNKEEFLADHPFIYILRHNKTRTIIMLGRY 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 107/377 (28%)
serpinb5NP_001011282.1 serpinB5_maspin 1..375 CDD:381013 107/379 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.