DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and serpinc1

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001008153.1 Gene:serpinc1 / 493515 XenbaseID:XB-GENE-975782 Length:456 Species:Xenopus tropicalis


Alignment Length:406 Identity:114/406 - (28%)
Similarity:189/406 - (46%) Gaps:45/406 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EFAQGLEQFALCLHDHLCRASAGL-NIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLE 68
            |.:|...:||:..:.:|..:.... ||..|||||..:..|.::|....  |.||:.|...|..:.
 Frog    73 ELSQANAKFAIAFYKNLADSKQNTENIFMSPLSISQAFTMAKLGACNN--TLKELMEVFYFDTIS 135

  Fly    69 ---AQQVAESFGVVLKSYEQCQVLKMA---------NGLYVMKGLQVDEQFGHILEQKFRSKPME 121
               :.|:...|..:     .|::.:.|         |.|:..|.|..:|.:..|.|..:.:|.:.
 Frog   136 ERASDQIHYFFAKL-----NCRLFRKANKSSELVSVNRLFGEKSLTFNETYQDISELVYGAKLLP 195

  Fly   122 IDFGS--EQAASIINKWVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREE 184
            ::|..  |.:..|||.||..:|...|.|:|...|:|.|:.|.|:|.|:|||.|...||.:.|:.|
 Frog   196 LNFKEKPELSREIINNWVSDKTEKRITDVIPVGVITPDTVLVLINAIYFKGLWKSKFNSENTKME 260

  Fly   185 DFFGSDRPTRVRMMHVCENFF-FAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSD 248
            .|:..:....:......|..| ::.........|.:.|...::.|:::||..::.|..:|:.|  
 Frog   261 QFYPDESNHCLAATMYQEGIFRYSSFKDDGVQVLELPYKGDDITMVLVLPSPETPLMKVEQNL-- 323

  Fly   249 ISLEVVSSAMNLEK---VDVKIPSFTAEFQQELSQVLMLMGMNRIFS-GQAELGGMLQ-SEESLF 308
             :||.:.:.:...:   :.|.:|.|..|....:.:.|..||:..:|. ..|:|.|::. ....|:
 Frog   324 -TLEKLGNWLQKSRELQLSVYLPRFRVEDSFSVKEKLQQMGLVDLFDPNSAKLPGIVAGGRTDLY 387

  Fly   309 VSQIVHKAFIEINEVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAIKD-NTHGLLFAGH 372
            ||...||||:|:||.|:||||:||.:.|.||:...:   ..|.|||||...|:: ..:.:||.|.
 Frog   388 VSDAFHKAFLEVNEEGSEAAASTAVILTGRSLNLNR---ITFRANRPFLVFIREVAINSVLFMGR 449

  Fly   373 FITTKVEQSEKCNTCT 388
            .          .|.||
 Frog   450 V----------ANPCT 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 109/382 (29%)
serpinc1NP_001008153.1 serpinC1_AT3 61..455 CDD:381002 112/404 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.110

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