DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Db and serpine2

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_988931.2 Gene:serpine2 / 394528 XenbaseID:XB-GENE-947567 Length:395 Species:Xenopus tropicalis


Alignment Length:365 Identity:110/365 - (30%)
Similarity:186/365 - (50%) Gaps:45/365 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLEAQQVAESF-----GVVLKSYEQCQV 88
            |.:.||..|.....||::| ::|. |.|::...:|:   :..:||:|.     .:|.|..:  .:
 Frog    49 NFVMSPHGISSVLGMLQLG-ADGK-TKKQLMTVMRY---KINEVAKSLKKINRAIVAKKNK--DI 106

  Fly    89 LKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGSEQ-AASIINKWVESQTNNLIKDIIGPR 152
            :..|||::.....:::..|.:..:..|.|....:||..:. ||||||:||::|||.:|:.:|.|.
 Frog   107 VTSANGVFASSVFKMESSFVYKNKDVFHSDVRSVDFQEKNTAASIINQWVKNQTNGMIEGLISPE 171

  Fly   153 VLTKD-SRLCLVNGIHFKGEWSISFNEKETREEDFFGSD-RPTRVRMMHVCENFFFAVLPMFEA- 214
            :|... :||.|||.::|||.|...|..:.|::..|.|.| :..:|.|:        |.|.:|.: 
 Frog   172 LLDSSVTRLVLVNALYFKGLWKSRFQPENTKKRTFHGPDGKDYQVPML--------AQLSLFRSG 228

  Fly   215 ----------TALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEVVSSAMNL--EKVDVKI 267
                      ..:.:.|...:|:|::.||.|:|  |.|...:..||.:.:.|.|.:  ::|.:.:
 Frog   229 SASTPNGLWYNVIELPYHGGSLSMLVALPTEES--TPLSAIIPHISTKTLQSWMTMTPKRVQLIL 291

  Fly   268 PSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEINEVGTEAAAATA 332
            |.|:.|.:.:|.:.|..:|:..:|.........:...|||.||.::.||.||:||.||:|:.||.
 Frog   292 PKFSVEAEADLKEPLRNLGITEMFDVSKANFAKITRSESLHVSHLLQKAKIEVNEDGTKASGATT 356

  Fly   333 AVATFRSMPARQGPPKVFHANRPFFYAIKDN-THGLLFAG 371
            ||...||      .|:.|..:|||.:.|:.| |..:||.|
 Frog   357 AVLIARS------SPRWFTVDRPFLFFIRHNPTGAVLFTG 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 110/365 (30%)
serpine2NP_988931.2 serpinE2_GDN 30..393 CDD:381039 110/365 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

Return to query results.
Submit another query.