DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Serpinb3d

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_958764.1 Gene:Serpinb3d / 394252 MGIID:2683295 Length:387 Species:Mus musculus


Alignment Length:390 Identity:121/390 - (31%)
Similarity:192/390 - (49%) Gaps:35/390 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FAQGLEQFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFG----- 65
            ||....:|.|.|:..| |.|.. ||.|||:|:..:.|||.:|..  :.|.:::.:.|.|.     
Mouse     4 FAVATTKFTLELYRQL-RESDN-NIFYSPISMMRTLAMLLLGAK--ANTEQQIKKVLHFNETTKK 64

  Fly    66 -------GLEAQQVAESFGVV---LKSYEQCQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPM 120
                   ..:.:.|.:.|.::   |..:.....||:.|.:|..|.....:.|...:.:.:::...
Mouse    65 TTEKSAESHDEENVHQQFQMLMTQLNKFNNAYDLKVPNSIYGAKDFPFLQTFLKDIRKYYQANVE 129

  Fly   121 EIDF--GSEQAASIINKWVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETRE 183
            .:||  .:|::...||.|:..|||..|||:.....|...:.|.|||.::|||:|:..|:||.|||
Mouse   130 SLDFAHAAEESQKKINSWMARQTNGKIKDLFPSGSLNSSTILVLVNAVYFKGQWNHKFDEKHTRE 194

  Fly   184 EDFF---GSDRPTRVRMMHVCENFFFAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKK 245
            |.|:   .:.:|  |:||.....|.|..|...:|..:.:.|....|:|.:|||.|...|...|::
Mouse   195 EKFWLNKNTSKP--VQMMKQRNKFNFIFLENVQAKIVEIPYKGKELSMFVLLPVEIDGLKKFEEQ 257

  Fly   246 LSDISLEVVSSAMNLEKVD--VKIPSFTAEFQQELSQVLMLMGMNRIFSGQ-AELGGMLQSEESL 307
            |:...|...:.|.|:...:  :.:|.|..|.:.:|...|..|||...|..| |:..||..| :.|
Mouse   258 LTADKLLQWTRAENMHMTELYLSLPQFKVEEKYDLRVPLEHMGMVDAFDPQKADFSGMSNS-QGL 321

  Fly   308 FVSQIVHKAFIEINEVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAIKDN-THGLLFAG 371
            .||:::||:|:|:||.|.|||.|.:..:...|:|    .|..|..|.||.:.:|.| |:.:||.|
Mouse   322 VVSKVLHKSFVEVNEEGAEAATAMSVESRSLSVP----KPNDFSCNHPFLFVMKQNKTNSILFFG 382

  Fly   372  371
            Mouse   383  382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 119/384 (31%)
Serpinb3dNP_958764.1 SERPIN 7..387 CDD:294093 119/387 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.830

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