DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Serpinb1c

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_006516771.1 Gene:Serpinb1c / 380839 MGIID:2445363 Length:408 Species:Mus musculus


Alignment Length:372 Identity:123/372 - (33%)
Similarity:191/372 - (51%) Gaps:25/372 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLE-AQQVAESF 76
            |||.|...|..::...|.|:||:||..:.||:.:| :.|| ||.::.:.|.|...| .....:|.
Mouse    44 FALELFHTLNESNPTGNTIFSPVSISSALAMVYLG-ARGS-TAAQLSKTLHFDSAEDIHSQFQSL 106

  Fly    77 GVVLKSYEQCQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDF--GSEQAASIINKWVES 139
            ...:........||:||.||..|......::...:::.:.:....:||  .||.|...||:||:.
Mouse   107 TAEVSKRGASHTLKLANRLYGEKTYNFLPEYLASIQKTYSADLALVDFQHASEDARKEINQWVKG 171

  Fly   140 QTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGSDRPTR-VRMMHVCEN 203
            ||...|:::....|:...::|.|||..:|||.|...|..::|.:..|..|.:.|: |:||::..|
Mouse   172 QTEEKIQELFAVGVVDSMTKLVLVNATYFKGMWQKKFMARDTTDAPFRLSKKVTKTVKMMYLKNN 236

  Fly   204 FFFAVLPMFEATALRMNYSACNLAMIILLP----DEKSNLTSLEKKLSDISLEVVSSAMNLEKVD 264
            ..|..:|..:...|.|.|....|:|:||||    ||.:.|..:||:|   :||.:....||:.:|
Mouse   237 LPFGYIPDLKCKVLEMPYQGGELSMVILLPEDIEDETTGLEEIEKQL---TLEKLQECENLQNID 298

  Fly   265 --VKIPSFTAEFQQELSQVLMLMGMNRIF-SGQAELGGMLQSEESLFVSQIVHKAFIEINEVGTE 326
              ||:|.|..|....|:..|..:|:..:| |.:|:|.||..|.: ||:|:||||:::|:||.|||
Mouse   299 VCVKLPKFKMEESYILNSNLGQLGVQDLFSSSKADLSGMSGSRD-LFISKIVHKSYVEVNEEGTE 362

  Fly   327 A-AAATAAVATFRSMPARQGPPKVFHANRPFFYAIKDN-THGLLFAG 371
            . ||....|.....||..      |..:.||.:.|:.| |..:||.|
Mouse   363 TDAAMPGTVVGCCLMPME------FTVDHPFLFFIRHNPTAHVLFLG 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 123/372 (33%)
Serpinb1cXP_006516771.1 serpinB1_LEI 34..408 CDD:381028 123/372 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.930

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