DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and AT1G62160

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_176407.2 Gene:AT1G62160 / 3767608 AraportID:AT1G62160 Length:220 Species:Arabidopsis thaliana


Alignment Length:155 Identity:52/155 - (33%)
Similarity:70/155 - (45%) Gaps:36/155 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 NLAMIILLPDEKSNLTSLEKKLSDISLEVVSSAMNLEKVDV---KIPSFTAEFQQELSQVLMLMG 286
            |.:|...|||:|..|..|.|:::. :...:.|....|:|:|   :||.|..||..|.|.|.    
plant    87 NFSMYFYLPDKKGELDDLLKRMTS-TPGFLDSHTPRERVEVDEFRIPKFKIEFGFEASSVF---- 146

  Fly   287 MNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEINEVGTEAAAATAAVATFRSMPARQGPPKV-- 349
                            |:..:.|| ...||.|||:|.|||||||||.|..      ..|...|  
plant   147 ----------------SDFEIDVS-FYQKALIEIDEEGTEAAAATAFVDN------EDGCGFVET 188

  Fly   350 --FHANRPFFYAIKDNTHG-LLFAG 371
              |.|:.||.:.|::...| :||||
plant   189 LDFVADHPFLFLIREEQTGTVLFAG 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 52/155 (34%)
AT1G62160NP_176407.2 SERPIN <43..218 CDD:294093 52/155 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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