DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Db and serpinb1l4

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_956235.2 Gene:serpinb1l4 / 335229 ZFINID:ZDB-GENE-030131-7169 Length:433 Species:Danio rerio


Alignment Length:438 Identity:132/438 - (30%)
Similarity:212/438 - (48%) Gaps:77/438 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEFAQGLEQFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFG--- 65
            |..:....||:|.|...:...:|..|:.|||:||..:.||:.:| ::|: ||.:|.:.|.|.   
Zfish     2 ESLSAANTQFSLNLFKKISGGNASGNVFYSPVSISSALAMVSLG-AKGN-TADQMFKVLGFNNPP 64

  Fly    66 --------------------GLEAQ---------------------------------QVAESFG 77
                                |:::|                                 |:..||.
Zfish    65 KPGGATPTPAQATQKPKWTCGVKSQHEPQALQQPQKFELPADLKKCPAQPVPGQKAEEQIHSSFN 129

  Fly    78 VVLKSYEQ---CQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGSEQAASI--INKWV 137
            .::....:   ..||.:||.||..:..|..|::....::.:.:...::||.::..||.  |||||
Zfish   130 KLMSELNKPGAPYVLSLANRLYGEQTYQFLEKYLSDAKKYYAAGLEKVDFKNKSEASCVNINKWV 194

  Fly   138 ESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGSDRPTR-VRMMHVC 201
            |..|...|||::....:...:||.|||.|:|||.|...|.::.|::..|..:...|: |:|||..
Zfish   195 EKNTQEKIKDLLPSGAIDAMTRLVLVNAIYFKGNWEKKFPKEATKDGQFKLNKNQTKPVKMMHQK 259

  Fly   202 ENFFFAVLPMFEATALRMNYSACNLAMIILLPDE----KSNLTSLEKKLSDISLEVVSSAMNLEK 262
            ..|.|.|:|...:..|.:.|...||:|:|:||||    .:.|..||:.|:...|...:..|..::
Zfish   260 AQFPFVVIPEINSQILELPYVGKNLSMLIILPDEIEDATTGLQKLERALTYEKLMQWTKVMRQQE 324

  Fly   263 VDVKIPSFTAEFQQELSQVLMLMGMNRIFSGQ-AELGGMLQSEESLFVSQIVHKAFIEINEVGTE 326
            |.|.:|.|..|...::..:|:.|||..:|..| ..|.|| .|...|.:|:::||||:|:||.|||
Zfish   325 VQVSLPKFKTEQTYDMKSLLVSMGMEDVFDPQKVNLTGM-SSSNDLVLSKVIHKAFVEVNEEGTE 388

  Fly   327 AAAATAAVATFRSMPARQGPPKVFHANRPFFYAIKDN-THGLLFAGHF 373
            |||||.||.:.|::      .::|:|:.||.:.|:.| |:.:||.|.|
Zfish   389 AAAATGAVVSIRTL------AQIFNADHPFLFFIRHNSTNTILFYGRF 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 130/428 (30%)
serpinb1l4NP_956235.2 SERPIN 4..433 CDD:294093 131/436 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 218 1.000 Domainoid score I2586
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.830

Return to query results.
Submit another query.