DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Serpinb1b

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_038952280.1 Gene:Serpinb1b / 306891 RGDID:1560658 Length:380 Species:Rattus norvegicus


Alignment Length:381 Identity:124/381 - (32%)
Similarity:197/381 - (51%) Gaps:20/381 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEFAQGLEQFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSA-TAKEMDEGLRFGGL 67
            |:.:.....|||.|...|..:|...| |:||.||..:.||:.:|....|| ::..:.|...|..:
  Rat     2 EQLSSANSLFALELFHTLSESSPTGN-IFSPFSISSALAMVFLGAKGSSAPSSLRLAETFHFDSV 65

  Fly    68 E-AQQVAESFGVVLKSYEQCQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDF--GSEQA 129
            | .....:|....::.:.....||:||.||..|......:|....::.:.:....:||  .||.|
  Rat    66 EDIHSRFQSLNAEMRKHGASHTLKVANRLYGEKTYNFLPEFLASTQKMYGADLAPVDFQHASEDA 130

  Fly   130 ASIINKWVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGSDRPTR 194
            ...|||||:.||...|.:::...|:...::|.|||.|:|||.|...|..:.|.:..|..:.:.|:
  Rat   131 RKEINKWVKGQTEGKIPELLAGGVVNSTTKLVLVNAIYFKGIWQEKFLTRHTTDAPFRLNKKDTK 195

  Fly   195 -VRMMHVCENFFFAVLPMFEATALRMNYSACNLAMIILLP----DEKSNLTSLEKKLSDISLEVV 254
             |:||:..|.|.|..:|..:...|.|.|....|:|:||||    ||.:.|..:|::|:...|...
  Rat   196 MVKMMYQKEKFPFGYIPDLKCKVLEMPYQGGELSMVILLPEDIEDESTGLQKIEEQLTLEKLYEW 260

  Fly   255 SSAMNLEKVD--VKIPSFTAEFQQELSQVLMLMGMNRIF-SGQAELGGMLQSEESLFVSQIVHKA 316
            :...||:::|  |.:|.|..|....|:..|..:|:..:| |.:|:|.||.:|.: :|:|:||||:
  Rat   261 TKHENLKEIDVHVNLPKFKIEESYILNSNLGRLGLQDLFSSSKADLSGMSESRD-IFISKIVHKS 324

  Fly   317 FIEINEVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAIKDN-THGLLFAG 371
            |:|:||.|||||||||.:..:..:..     :.|..:.||.:.|:.| |..:||.|
  Rat   325 FVEVNEEGTEAAAATAGLVEYCLVSI-----EAFIVDHPFLFFIRHNPTANMLFFG 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 123/373 (33%)
Serpinb1bXP_038952280.1 serpinB1_LEI 1..380 CDD:381028 124/381 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.030

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