DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Serpinb3

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001382662.1 Gene:Serpinb3 / 304688 RGDID:1549766 Length:387 Species:Rattus norvegicus


Alignment Length:394 Identity:132/394 - (33%)
Similarity:206/394 - (52%) Gaps:43/394 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FAQGLEQFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFG----- 65
            ||:...||.|.|:..| |.|.. ||.||||||..:.|||::| ::|: |.|::::.|:..     
  Rat     4 FAKATTQFTLELYRQL-RDSED-NIFYSPLSIMTALAMLQLG-AKGN-TEKQIEKALQLSETTKK 64

  Fly    66 -------GLEAQQVAESFGVVLK-------SYEQCQVLKMANGLYVMKGLQVDEQFGHILEQKFR 116
                   ..:.:.|.|.|..::.       :|:    ||..|.:|..||....:.|...:::.::
  Rat    65 PKEKSADSHDEENVHEQFRKIMNQLNKSNGAYD----LKSPNSIYGAKGFPFLQTFMEDIKKYYQ 125

  Fly   117 SKPMEIDF--GSEQAASIINKWVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEK 179
            :....:||  .:|::...||.|||::||..|||:.....|...:.|.|||.::|||:|:..|:|:
  Rat   126 ANVESLDFAHAAEESQKKINSWVENKTNGKIKDLFPRGSLNSSTILVLVNAVYFKGQWNHKFDEQ 190

  Fly   180 ETREEDFF---GSDRPTRVRMMHVCENFFFAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTS 241
            .|||:.|:   .:.:|  |:||.....|.|..|...:|..:.:.|....|:|.||||.|...|..
  Rat   191 RTREDKFWLNKNTSKP--VQMMRQTNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKK 253

  Fly   242 LEKKLSDISLEVVSSAMNLE--KVDVKIPSFTAEFQQELSQVLMLMGMNRIFSGQ-AELGGMLQS 303
            ||:|||..:|...:|..|:.  ::::.:|.|..:.:.:|...|..|||...|:.| |:..|| .|
  Rat   254 LEEKLSADTLLAWTSPKNMRMTQLNLSLPRFKVQEKYDLPGPLEHMGMVDAFNPQKADFSGM-SS 317

  Fly   304 EESLFVSQIVHKAFIEINEVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAIK-DNTHGL 367
            .:.|.||:::||:|:|:||.|.||||||.......|.|.    ...|..||||...|| :||:.:
  Rat   318 TKGLVVSKVLHKSFLEVNEEGAEAAAATGVETRILSAPR----TTEFTCNRPFIVFIKPNNTNSI 378

  Fly   368 LFAG 371
            ||.|
  Rat   379 LFFG 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 130/388 (34%)
Serpinb3NP_001382662.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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