DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and HMSD

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_016881199.1 Gene:HMSD / 284293 HGNCID:23037 Length:217 Species:Homo sapiens


Alignment Length:114 Identity:31/114 - (27%)
Similarity:57/114 - (50%) Gaps:9/114 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LSIHISAAMLRMGTSEGSATAKEMDEGLRFG--GLEAQQVAESFGVVLKSYEQCQ---VLKMANG 94
            :||..:.||:.|| ::|: ||.:|.:.|.|.  |.|...:...|..:|.:..:..   ||:.|||
Human     1 MSISSALAMVFMG-AKGN-TAAQMSQALCFSKIGGEDGDIHRGFQSLLVAINRTDTEYVLRTANG 63

  Fly    95 LYVMKGLQVDEQFGHILEQKFRSKPMEIDF--GSEQAASIINKWVESQT 141
            |:..|.......|.....:.:::...::||  .:|::.:.:|.||..:|
Human    64 LFGEKSYDFLTGFTDSCGKFYQATIKQLDFVNDTEKSTTRVNSWVADKT 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 31/114 (27%)
HMSDXP_016881199.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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