DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Serpina3n

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_113719.3 Gene:Serpina3n / 24795 RGDID:3747 Length:418 Species:Rattus norvegicus


Alignment Length:363 Identity:109/363 - (30%)
Similarity:184/363 - (50%) Gaps:27/363 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLEA--QQVAES 75
            ||..|:..|...:...|:::|||||..:.|::.:|....|  .:|:.|||:|...|.  .::...
  Rat    54 FAFSLYKKLALRNPDKNVVFSPLSISAALAVVSLGAKGNS--MEEILEGLKFNLTETPETEIHRG 116

  Fly    76 FGVVLKSYEQCQ---VLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDF-GSEQAASIINKW 136
            ||.:|:...|.:   .:...|.|::.|.|||..:|....:..::::....|| .|.:|..:||.:
  Rat   117 FGHLLQRLSQPRDEIQISTGNALFIEKRLQVLAEFQEKAKALYQAEAFTADFQQSREAKKLINDY 181

  Fly   137 VESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFF-GSDRPTRVRMMHV 200
            |..||...|:.:|  ..|.|.:.:.|||.|:|||:|.:.|:.::|.:.:|: |..||.:|.||.:
  Rat   182 VSKQTQGKIQGLI--TNLAKKTSMVLVNYIYFKGKWKVPFDPRDTFQSEFYSGKRRPVKVPMMKL 244

  Fly   201 CENFFFAVLPM-----FEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEVVSSAMNL 260
            .:    ...|.     ...|.:.:.|:. |.:.:.:|||: ..:..:|..|...:|.....::..
  Rat   245 ED----LTTPYVRDEELNCTVVELKYTG-NASALFILPDQ-GKMQQVEASLQPETLRRWKDSLRP 303

  Fly   261 EKVD-VKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEINEVG 324
            ..:| :.:|.|:......|..||..:|:..:||.||:|.| :..::.|.|||:||||.:::.|.|
  Rat   304 SMIDELYLPKFSISADYNLEDVLPELGIKEVFSTQADLSG-ITGDKDLMVSQVVHKAVLDVAETG 367

  Fly   325 TEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAIKD 362
            |||||||.  ..|..|.|:. .|.:...:|||...|.|
  Rat   368 TEAAAATG--VKFVPMSAKL-DPLIIAFDRPFLMIISD 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 109/363 (30%)
Serpina3nNP_113719.3 serpinA3_A1AC 37..418 CDD:381019 109/363 (30%)
RCL 367..394 12/29 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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