DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Serpina4

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_659565.2 Gene:Serpina4 / 246328 RGDID:708581 Length:423 Species:Rattus norvegicus


Alignment Length:389 Identity:111/389 - (28%)
Similarity:192/389 - (49%) Gaps:35/389 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EFAQGLEQFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFG--GL 67
            :.|.|...||..|:..:...::..||.:|||||.:|.|:|  .|..|..|..::.|||.|.  .|
  Rat    47 QIASGNANFAFRLYHLIASQNSEKNIFFSPLSISVSLAIL--STGAGGDTQAQILEGLGFNLTKL 109

  Fly    68 EAQQVAESF----GVVLKSYEQCQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGSEQ 128
            ...::.|.|    ..:.:.:.:.|: .:.:.|.:.:.||:..:|...:|..:.||.:..:|..::
  Rat   110 SLPEIHEGFRSLQHTIARPFTEPQI-SVGSALILSQNLQILSEFVSAIETSYNSKVLHANFRDKE 173

  Fly   129 AA-SIINKWVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGSDRP 192
            || .:||.:|:..|...||:::..  |:.|.::.|||.|.|:|.|...|........||: .|..
  Rat   174 AAVQLINNYVKQNTQGKIKNLVSD--LSPDVKMVLVNYIFFQGLWKKPFPSSRVSTSDFY-VDEN 235

  Fly   193 TRVR---MMHVCENFFFAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISL--- 251
            |.|:   |:...|:.::........|.|||:|....:|..| |||: ..:..:|:.||...|   
  Rat   236 TVVKIPMMLQDKEDHWYLEDRRVPCTVLRMDYRGDAVAFFI-LPDQ-GKMNEVEQVLSPGMLLRW 298

  Fly   252 -EVVSSAMNLEKVDVKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHK 315
             .::.:.....|:.:::|.|:.....||.::|..:|...:|:..|.... :..:|.|::|::.||
  Rat   299 KRLLQNRFFYRKLILQLPKFSISNSYELDEILPDLGFQDLFTPNANFSN-ISKKEKLYLSKVFHK 362

  Fly   316 AFIEINEVGTEAAAATAAVATFRSMPARQGPPK----VFHANRPFFYAI-KDNTHGLLFAGHFI 374
            ..:::|||||:|||||.:.|||.|     ..||    :|  ||||...: ..::..:||.|..:
  Rat   363 TVLDVNEVGTKAAAATGSFATFFS-----AQPKKRYLIF--NRPFLVILYSTSSQDILFMGKVV 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 109/379 (29%)
Serpina4NP_659565.2 SERPIN 52..418 CDD:294093 109/381 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.110

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