DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Serpine1

DIOPT Version :10

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_036752.2 Gene:Serpine1 / 24617 RGDID:3249 Length:402 Species:Rattus norvegicus


Alignment Length:396 Identity:105/396 - (26%)
Similarity:186/396 - (46%) Gaps:43/396 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKDEEFAQGLEQFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFG 65
            :.:...||....|.:.:..|:.:||...|:::||..:....|||::.|:  ..|.:::.:.:.|.
  Rat    26 LPESHTAQQATNFGVKVFQHVVQASKDRNVVFSPYGVSSVLAMLQLTTA--GKTRQQIQDAMGFN 88

  Fly    66 GLE---AQQVAESFGVVLKSYEQCQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGS- 126
            ..|   |..:.:....::.|:.:.:: ..|:.::|.:.|::.:.|.....:.||:...::||.. 
  Rat    89 ISERGTAPALRKLSKELMGSWNKNEI-STADAIFVQRDLELVQGFMPHFFKLFRTTVKQVDFSEM 152

  Fly   127 EQAASIINKWVESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGSDR 191
            |:|..|||.|||..|..:|.|::....:.:.:||.|||.::|.|:|...|.|..|.:..|..||.
  Rat   153 ERARFIINDWVERHTKGMISDLLAKGAVNELTRLVLVNALYFNGQWKTPFLEASTHQRLFHKSDG 217

  Fly   192 PTRVRMMHVCENFF----FAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLE 252
            .|....|....|.|    |......|...|.:.|....|:|.|..|.||           |:.|.
  Rat   218 STISVPMMAQNNKFNYTEFTTPDGHEYDILELPYHGETLSMFIAAPFEK-----------DVPLS 271

  Fly   253 VVSSAMNLEKVD------------VKIPSFTAEFQQELSQVLMLMGMNRIFSG-QAELGGMLQSE 304
            .:::.::.|.:.            :.:|.|:.|.:.:|...|..:||..|||. ||:... |..:
  Rat   272 AITNILDAELIRQWKSNMTRLPRLLILPKFSLETEVDLRGPLEKLGMTDIFSSTQADFTS-LSDQ 335

  Fly   305 ESLFVSQIVHKAFIEINEVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAIKDN-THGLL 368
            |.|.|:|.:.|..||:||.||.|:::||.:.:     ||..|.::. .:|.|.:.::.| |..:|
  Rat   336 EQLSVAQALQKVKIEVNESGTVASSSTAILVS-----ARMAPTEMV-LDRSFLFVVRHNPTETIL 394

  Fly   369 FAGHFI 374
            |.|..:
  Rat   395 FMGQLM 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 serpin42Da-like 9..372 CDD:381065 102/384 (27%)
Serpine1NP_036752.2 serpin 29..402 CDD:476815 105/393 (27%)

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