DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Serpinb6d

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001070258.1 Gene:Serpinb6d / 238568 MGIID:2667783 Length:375 Species:Mus musculus


Alignment Length:357 Identity:116/357 - (32%)
Similarity:182/357 - (50%) Gaps:22/357 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLEA---QQVAESFGVVLKSYEQCQ--- 87
            ||..||.||..|.||..:|..|.  ||:::.:.|......:   :.:.:.|.::|....:..   
Mouse    26 NIFLSPPSIASSLAMTLLGAKEN--TARQIRQTLSLDKCSSDPCEDIHQDFHLLLNEVNKTDPGI 88

  Fly    88 VLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDF--GSEQAASIINKWVESQTNNLIKDIIG 150
            :||..|.|:|.|...:.:.|....::.::::..|:||  .:||:...||.||...|:..|||::.
Mouse    89 ILKTENRLFVEKTFHIKKSFKDASQKFYKAEIEELDFKGDTEQSRQHINTWVTKNTDEKIKDLLS 153

  Fly   151 PRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGSDRPTR-VRMMHVCENFFFAVLPMFEA 214
            |..:..::||.|||..:|||.|...||:::|||..|..|....: |:||.....|....:.....
Mouse   154 PGSVNSNTRLVLVNDFYFKGYWEKPFNKEDTREMPFRVSKNVVKPVQMMFQKSTFKITYIEEIST 218

  Fly   215 TALRMNYSACNLAMIILLPDEKSNLTSLEKKLS-DISLEVVS-SAMNLEKVDVKIPSFTAEFQQE 277
            ..|.:.|:...|.|||:||||...|..||||:: :..:|..| ..||.|:|:|.:|.|..|...:
Mouse   219 KILLLPYAGNKLNMIIMLPDEHVELRMLEKKMTYEKFVEWTSLDKMNEEEVEVFLPRFKLEEIYD 283

  Fly   278 LSQVLMLMGMNRIF-SGQAELGGMLQSEESLFVSQIVHKAFIEINEVGTEAAAATAAVATFRSMP 341
            ::.||..|||...| .|:|:..| :.|::.||:|::::|||||:.|.||:.||||..|     |.
Mouse   284 MNNVLYKMGMTDAFEEGRADFSG-ISSKQGLFLSKVIYKAFIEVIEKGTKVAAATDIV-----MM 342

  Fly   342 ARQGPPKVFHANRPFFYAIKDNTHGLLFAGHF 373
            ........|.|:.||.:.  ..|...:..|.|
Mouse   343 GASPTTHTFCADHPFIFT--HMTEDFMIIGRF 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 115/355 (32%)
Serpinb6dNP_001070258.1 SERPIN 4..375 CDD:294093 116/357 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.830

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