DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Serpina3j

DIOPT Version :10

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001094942.1 Gene:Serpina3j / 238395 MGIID:2182843 Length:420 Species:Mus musculus


Alignment Length:365 Identity:104/365 - (28%)
Similarity:179/365 - (49%) Gaps:35/365 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLEAQQ--VAES 75
            ||..|:..|...:...|.::|||||.|:.|.|.:| ::|: |.:|:.|||:|...|..:  :.:.
Mouse    54 FAFSLYKKLALKNPHKNFVFSPLSITIALASLSLG-AKGN-TLEEILEGLKFNLTETPEADIHQG 116

  Fly    76 FGVVLKSYEQ--CQV-LKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGS-EQAASIINKW 136
            ||.:|:...|  .|| :...|.:.|.|.||:..:|.......:.::....||.. .:|..::|.:
Mouse   117 FGHLLQRLSQPGDQVQISTGNSMVVEKHLQILAEFKEKARALYHTEVFTADFQQPREARKLLNDY 181

  Fly   137 VESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGS---DR--PTRVR 196
            |.:||..:||:::..  |.:.:.:.:.|...|.|:|:::|:..||    |.|:   ||  |.:|.
Mouse   182 VSNQTQGMIKELVSD--LEERTSMVMTNFALFNGKWNMTFDPYET----FMGTFIEDRRTPVKVS 240

  Fly   197 MMHVCENFFFAVLPMF-----EATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEVVSS 256
            ||.:.|    ...|.|     :.|.:.:||.....||.| |||: ..:..:|..|...:|.....
Mouse   241 MMKMKE----LRAPYFRDEKMKCTVVELNYKGNGKAMFI-LPDQ-GKMKQVEASLQPATLRGWRK 299

  Fly   257 AMNLEKVD-VKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEI 320
            ::....:| :.:|.|:......|..:|..:|:..:||.||:|.| :...:.:.||::.|.|.:::
Mouse   300 SLRPRMIDELYLPKFSISKNYRLENILPELGIKEVFSTQADLSG-ISGGKDVRVSRMFHSAALDM 363

  Fly   321 NEVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAI 360
            .|.||||.|.|.....|.|..:.   |.|.:.|.||.:.:
Mouse   364 TETGTEARATTRDKYDFLSTKSN---PTVVNLNTPFLFCV 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 serpin42Da-like 9..372 CDD:381065 104/365 (28%)
Serpina3jNP_001094942.1 serpinA3_A1AC 37..417 CDD:381019 104/365 (28%)

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