DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Db and Serpina3m

DIOPT Version :10

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_033279.2 Gene:Serpina3m / 20717 MGIID:98378 Length:418 Species:Mus musculus


Alignment Length:361 Identity:109/361 - (30%)
Similarity:188/361 - (52%) Gaps:27/361 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLEAQQ--VAES 75
            ||..|:..:...:...||::|||||..:.|::.:| ::|: |.:|:.|||:|...|..:  :.:.
Mouse    54 FAFSLYKKMALKNPDKNIVFSPLSISAALALVSLG-AKGN-TLEEILEGLKFNLTETSEADIHQG 116

  Fly    76 FGVVLKSYEQCQ---VLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGS-EQAASIINKW 136
            ||.:|:...|.:   .:.:.|.:::.|.||:..:|.......::::....||.. .:|..:||.:
Mouse   117 FGHLLQRLSQPEDQDQINIGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEATKLINDY 181

  Fly   137 VESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFF-GSDRPTRVRMMHV 200
            |.:||..:||.:|..  |...:.:.|||.|:|||:|.|||:.::|.|.:|: ...|..:|.||  
Mouse   182 VSNQTQGMIKKLISE--LDDRTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSVKVPMM-- 242

  Fly   201 CENFFFAVLPMF-----EATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEVVSSAMNL 260
              ...|.....|     ..:.|.:.|:. |.:.:.:|||: ..:..:|..|...:|.....::..
Mouse   243 --KMKFLTTRHFRDEELSCSVLELKYTG-NASALFILPDQ-GRMQQVEASLQPETLRKWWKSLKT 303

  Fly   261 EKV-DVKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEINEVG 324
            .|: ::.:|.|:......|..:|..:|:..|||.||:|.|:..::: |.|||:||||.:::.|.|
Mouse   304 RKIGELYLPKFSISTDYNLKDILPELGIKEIFSKQADLSGITGTKD-LSVSQVVHKAVLDVAETG 367

  Fly   325 TEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAI 360
            |||||||..:..|||   |:........||||...|
Mouse   368 TEAAAATGFIFGFRS---RRLQTMTVQFNRPFLMVI 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 serpin42Da-like 9..372 CDD:381065 109/361 (30%)
Serpina3mNP_033279.2 serpinA3_A1AC 37..418 CDD:381019 109/361 (30%)
RCL 367..392 12/27 (44%)

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