DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Db and Serpina3m

DIOPT Version :9

Sequence 1:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_033279.2 Gene:Serpina3m / 20717 MGIID:98378 Length:418 Species:Mus musculus


Alignment Length:361 Identity:109/361 - (30%)
Similarity:188/361 - (52%) Gaps:27/361 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLEAQQ--VAES 75
            ||..|:..:...:...||::|||||..:.|::.:| ::|: |.:|:.|||:|...|..:  :.:.
Mouse    54 FAFSLYKKMALKNPDKNIVFSPLSISAALALVSLG-AKGN-TLEEILEGLKFNLTETSEADIHQG 116

  Fly    76 FGVVLKSYEQCQ---VLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGS-EQAASIINKW 136
            ||.:|:...|.:   .:.:.|.:::.|.||:..:|.......::::....||.. .:|..:||.:
Mouse   117 FGHLLQRLSQPEDQDQINIGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEATKLINDY 181

  Fly   137 VESQTNNLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFF-GSDRPTRVRMMHV 200
            |.:||..:||.:|..  |...:.:.|||.|:|||:|.|||:.::|.|.:|: ...|..:|.||  
Mouse   182 VSNQTQGMIKKLISE--LDDRTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSVKVPMM-- 242

  Fly   201 CENFFFAVLPMF-----EATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEVVSSAMNL 260
              ...|.....|     ..:.|.:.|:. |.:.:.:|||: ..:..:|..|...:|.....::..
Mouse   243 --KMKFLTTRHFRDEELSCSVLELKYTG-NASALFILPDQ-GRMQQVEASLQPETLRKWWKSLKT 303

  Fly   261 EKV-DVKIPSFTAEFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEINEVG 324
            .|: ::.:|.|:......|..:|..:|:..|||.||:|.|:..::: |.|||:||||.:::.|.|
Mouse   304 RKIGELYLPKFSISTDYNLKDILPELGIKEIFSKQADLSGITGTKD-LSVSQVVHKAVLDVAETG 367

  Fly   325 TEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAI 360
            |||||||..:..|||   |:........||||...|
Mouse   368 TEAAAATGFIFGFRS---RRLQTMTVQFNRPFLMVI 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 109/361 (30%)
Serpina3mNP_033279.2 SERPIN 56..417 CDD:214513 107/359 (30%)
RCL 367..392 12/27 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.